RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SPO11Q9Y5K1 396 aa3.24□□□□□ -1.89
ITGB1-213ENST00000484088 SCDO00767 359 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 GABRDO14764 452 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 KATNA1O75449 491 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 SASH1O94885 1247 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 IL18BPO95998 194 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 ITGB3P05106 788 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 FAHP16930 419 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 SLC9A1P19634 815 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 AOAHP28039 575 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 SARSP49591 514 aaKnown RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 SCNN1BP51168 640 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 GRIN1Q05586 938 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 PDCD1Q15116 288 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 TBC1D10BQ4KMP7 808 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 GPR158Q5T848 1215 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 RNF219Q5W0B1 726 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 CC2D1AQ6P1N0 951 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 CD300LDQ6UXZ3 194 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 SPATS2Q86XZ4 545 aaKnown RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 CMIPQ8IY22 773 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 TXNDC5Q8NBS9 432 aaKnown RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 ASB15Q8WXK1 588 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 WWC2-AS2Q96NR7 200 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 GPR101Q96P66 508 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 PTPN18Q99952 460 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 CCDC8Q9H0W5 538 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 CABP5Q9NP86 173 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 KCNH7Q9NS40 1196 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 MCM8Q9UJA3 840 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 DBR1Q9UK59 544 aaKnown RBP3.23□□□□□ -1.89
ITGB1-213ENST00000484088 ATP23Q9Y6H3 246 aa3.23□□□□□ -1.89
ITGB1-213ENST00000484088 A0A1W2PQJ5 194 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 KRIT1O00522 736 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 DDX3XO00571 662 aaKnown RBP eCLIP3.22□□□□□ -1.893e-13■■■■□ 23.1
ITGB1-213ENST00000484088 PPM1GO15355 546 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 GAS7O60861 476 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 MMEP08473 750 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 CYP2C8P10632 490 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 MC4RP32245 332 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 CNR2P34972 360 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 GUCY2FP51841 1108 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 KIF11P52732 1056 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 ANAPC15P60006 121 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 TMPRSS15P98073 1019 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 RBM10P98175 930 aaKnown RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 EXOSC10Q01780 885 aaKnown RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 DBPQ10586 325 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 FAM50AQ14320 339 aaKnown RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 CHRNA2Q15822 529 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 ATP13A4Q4VNC1 1196 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 PAN2Q504Q3 1202 aaKnown RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 BROXQ5VW32 411 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 BTBD8Q5XKL5 378 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 CD276Q5ZPR3 534 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 LYSMD2Q8IV50 215 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 NLGN4XQ8N0W4 816 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 CNTD1Q8N815 330 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 SLC5A5Q92911 643 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 USP7Q93009 1102 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 ZNF496Q96IT1 587 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 ZSWIM3Q96MP5 696 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 YTHDC1Q96MU7 727 aaKnown RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 ORAI2Q96SN7 254 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 BDH2Q9BUT1 245 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 AMNQ9BXJ7 453 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 AP5M1Q9H0R1 490 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 PRDM12Q9H4Q4 367 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 TOPORSQ9NS56 1045 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-213ENST00000484088 HOMER2Q9NSB8 354 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 SLC5A4Q9NY91 659 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 DTLQ9NZJ0 730 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 KLHL42Q9P2K6 505 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 NUDT5Q9UKK9 219 aa3.22□□□□□ -1.89
ITGB1-213ENST00000484088 TNKSO95271 1327 aa3.21□□□□□ -1.89
ITGB1-213ENST00000484088 ALG1L2C9J202 215 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 GOLGA6L22H0YM25 854 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 H7C1D1 291 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 KRT37O76014 449 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 KLHL18O94889 574 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 HSP90B1P14625 803 aaKnown RBP3.21□□□□□ -1.9
ITGB1-213ENST00000484088 IBSPP21815 317 aaPredicted RBP3.21□□□□□ -1.9
ITGB1-213ENST00000484088 GJA4P35212 333 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 FNTBP49356 437 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 KPNA1P52294 538 aaPredicted RBP3.21□□□□□ -1.9
ITGB1-213ENST00000484088 IL2P60568 153 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 HERVK_113P62684 666 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 LRRC32Q14392 662 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 EPHA7Q15375 998 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 RGL3Q3MIN7 710 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 CT47A1Q5JQC4 288 aaPredicted RBP3.21□□□□□ -1.9
ITGB1-213ENST00000484088 MCTP2Q6DN12 878 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 CABP7Q86V35 215 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 SLC41A1Q8IVJ1 513 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 ZNF610Q8N9Z0 462 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 ATL2Q8NHH9 583 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 PUS7LQ9H0K6 701 aaKnown RBP3.21□□□□□ -1.9
ITGB1-213ENST00000484088 CD248Q9HCU0 757 aa3.21□□□□□ -1.9
ITGB1-213ENST00000484088 PPP4R1LQ9P1A2 415 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms