RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SETDB2Q96T68 719 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PNMA3Q9UL41 463 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PPP2R3BQ9Y5P8 575 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 ZBTB43O43298 467 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 TIPRLO75663 272 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 IFNA14P01570 189 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 RGS2P41220 211 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 MDM2Q00987 491 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 STK4Q13043 487 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 XRCC4Q13426 336 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 ANGPTL8Q6UXH0 198 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 RNF169Q8NCN4 708 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 TRIT1Q9H3H1 467 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 IL1RAPL2Q9NP60 686 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 SH3BP4Q9P0V3 963 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CPP00450 1065 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CDC27P30260 824 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PDE6CP51160 858 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 AP2B1P63010 937 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CDR2LQ86X02 465 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 SMCR8Q8TEV9 937 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 SLC20A1Q8WUM9 679 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 MIEF2Q96C03 454 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 ANKRD36BP1Q96IX9 119 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 KIFC1Q9BW19 673 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CDCA7Q9BWT1 371 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 TTC21BQ7Z4L5 1316 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 HSPD1P10809 573 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 MAPKAPK2P49137 400 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CCDC157Q569K6 752 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 ESCO1Q5FWF5 840 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 LYSMD3Q7Z3D4 306 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 HAUS6Q7Z4H7 955 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 FLAD1Q8NFF5 587 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 SLITRK2Q9H156 845 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 MRPL47Q9HD33 250 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 ATG3Q9NT62 314 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 VAV3Q9UKW4 847 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PNMA8BQ9ULN7 279 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 SH3GLB1Q9Y371 365 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 STX7O15400 261 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 ATP9AO75110 1047 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ALDH1A1P00352 501 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 GNRH1P01148 92 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 HNRNPCP07910 306 aaKnown RBP eCLIP5.78□□□□□ -1.48
USF3-202ENST00000478658 GTF2E2P29084 291 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 SERPINH1P50454 418 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 ZFATQ9P243 1243 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ZNF180Q9UJW8 692 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 IQANK1A0A1B0GTG1 560 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 IKBKBO14920 756 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ITGA1P56199 1179 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ZC3H6P61129 1189 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 YWHAHQ04917 246 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 MTFR1Q15390 333 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 RARS2Q5T160 578 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 ZCCHC8Q6NZY4 707 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 STAMBPL1Q96FJ0 436 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 MAP10Q9P2G4 905 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 HFM1A2PYH4 1435 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 A0A087WUV0 522 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 CBFA2T3O75081 653 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 RGS20O76081 388 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SNUPNO95149 360 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 ACADSP16219 412 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 CBX5P45973 191 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TWISTNBQ3B726 338 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 GRHL2Q6ISB3 625 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 PKN3Q6P5Z2 889 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 BRINP3Q76B58 766 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 DPP10Q8N608 796 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 CCDC185Q8N715 623 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TTC8Q8TAM2 541 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SNX25Q9H3E2 840 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 DISC1Q9NRI5 854 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 DPP7Q9UHL4 492 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 DBR1Q9UK59 544 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 CDH7Q9ULB5 785 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TRIM17Q9Y577 477 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 APOC1P02654 83 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 COPB2P35606 906 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ILF3Q12906 894 aaKnown RBP eCLIP5.78□□□□□ -1.48
USF3-202ENST00000478658 FAM83BQ5T0W9 1011 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 PRPF40BQ6NWY9 871 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 NBPF5PQ86XG9 351 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 SH3TC1Q8TE82 1336 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 NCOA1Q15788 1441 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 MYL4P12829 197 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 IL10P22301 178 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SESN3P58005 492 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TMED1Q13445 227 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ZNF394Q53GI3 561 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ARMC3Q5W041 872 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TMIEQ8NEW7 156 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 VAT1LQ9HCJ6 419 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ATP6V1HQ9UI12 483 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 WBP11Q9Y2W2 641 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 ITSN2Q9NZM3 1697 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 IDH3BO43837 385 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms