RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 BRD9Q9H8M2 597 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 ZWILCHQ9H900 591 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 GPRC5BQ9NZH0 403 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 MARK1Q9P0L2 795 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 WHRNQ9P202 907 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 IFT80Q9P2H3 777 aaPredicted RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 MKL2Q9ULH7 1088 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 MAFFQ9ULX9 164 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 EMC9Q9Y3B6 208 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 NOC2LQ9Y3T9 749 aaKnown RBP3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHA9Q9Y5H5 950 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 RGPD1P0DJD0 1748 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 PRDM2Q13029 1718 aa3.3□□□□□ -1.88
HMGN4-202ENST00000477243 TULP4Q9NRJ4 1543 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CFAP54Q96N23 3096 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 A0A1B0GTH6 734 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CAPN8A6NHC0 703 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CHL1O00533 1208 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 RGS13O14921 159 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 HRO43593 1189 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 HTATSF1O43719 755 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CLEC3AO75596 197 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TRPA1O75762 1119 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 UBXN7O94888 489 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SLITRK5O94991 958 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SOD2P04179 222 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 NR3C2P08235 984 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ATP6V1B1P15313 513 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ATP2A2P16615 1042 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 XPAP23025 273 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 GBP1P32455 592 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 LSP1P33241 339 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ATP6V1E1P36543 226 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 PIK3CBP42338 1070 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 PHKA2P46019 1235 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 GPR3P46089 330 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 KCNJ6P48051 423 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 RPIAP49247 311 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 PAPOLAP51003 745 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CASP5P51878 434 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 MAPK10P53779 464 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 RELBQ01201 579 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CACNB2Q08289 660 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM29Q14134 588 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 PPP2R5DQ14738 602 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 STARD3Q14849 445 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 POLD3Q15054 466 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 PCSK7Q16549 785 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 HSF5Q4G112 596 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ANO6Q4KMQ2 910 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TJAP1Q5JTD0 557 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SLC10A5Q5PT55 438 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 VARS2Q5ST30 1063 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SAMD5Q5TGI4 173 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ISM2Q6H9L7 571 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ADGRD1Q6QNK2 874 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 RSPO2Q6UXX9 243 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 USP45Q70EL2 814 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 KRT25Q7Z3Z0 450 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SDCCAG8Q86SQ7 713 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 MTDHQ86UE4 582 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ANKRD13BQ86YJ7 626 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM59Q8IWR1 403 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC144CPQ8IYA2 1237 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TEX11Q8IYF3 940 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 PHACTR4Q8IZ21 702 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 EFHBQ8N7U6 833 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TSPYL6Q8N831 410 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 IGSF22Q8N9C0 903 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 KCT2Q8NC54 265 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CHST14Q8NCH0 376 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 OR8H1Q8NGG4 311 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ZSCAN18Q8TBC5 510 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 LMBR1Q8WVP7 490 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 LRTOMTQ8WZ04 291 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ELMO3Q96BJ8 720 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 MVB12AQ96EY5 273 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 GMCL1Q96IK5 515 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 FGD4Q96M96 766 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 YTHDC1Q96MU7 727 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SLC6A18Q96N87 628 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 NT5C1BQ96P26 610 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SPAG5Q96R06 1193 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 MPHOSPH8Q99549 860 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 MTRQ99707 1265 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 SDF4Q9BRK5 362 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CHCHD6Q9BRQ6 235 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 LRFN3Q9BTN0 628 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 XPO4Q9C0E2 1151 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CYP26B1Q9NR63 512 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 DISC1Q9NRI5 854 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 DIAPH3Q9NSV4 1193 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 OLA1Q9NTK5 396 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CACNA2D2Q9NY47 1150 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 NFKBIL1Q9UBC1 381 aaPredicted RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 APEX2Q9UBZ4 518 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 KLHL3Q9UH77 587 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CDC23Q9UJX2 597 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 RALYQ9UKM9 306 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 GPR34Q9UPC5 381 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms