RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 AP5Z1O43299 807 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 ZSCAN12O43309 604 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 WDHD1O75717 1129 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 UFL1O94874 794 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 TOP1P11387 765 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 XRCC5P13010 732 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 SCG2P13521 617 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 TNNT1P13805 278 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 FCGRTP55899 365 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 UBASH3AP57075 661 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 FANCCQ00597 558 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 MAP7Q14244 749 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 PTPN14Q15678 1187 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 ENOX2Q16206 610 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 FILIP1LQ4L180 1135 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 SOGA3Q5TF21 947 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 ZNF772Q68DY9 489 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 DYMQ7RTS9 669 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 DTX1Q86Y01 620 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 FBXL6Q8N531 539 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 IQUBQ8NA54 791 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 CTAGE1Q96RT6 745 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 PHF20Q9BVI0 1012 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 GJB4Q9NTQ9 266 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 IFNKQ9P0W0 207 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 VPS54Q9P1Q0 977 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 SEC63Q9UGP8 760 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 FBXO2Q9UK22 296 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 PYCARDQ9ULZ3 195 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 AP4E1Q9UPM8 1137 aa6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 COL1A1P02452 1464 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-204ENST00000474020 LAD1O00515 517 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 POLR2DO15514 142 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 AOC2O75106 756 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 PRDM1O75626 825 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 PRDX5P30044 214 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 GUCY1A2P33402 732 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 GTF2F1P35269 517 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 LONP1P36776 959 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 KCNJ6P48051 423 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 PLCD1P51178 756 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 TFAP4Q01664 338 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 TROAPQ12815 778 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 PNOCQ13519 176 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 STIM1Q13586 685 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 NFIXQ14938 502 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 PFKFB3Q16875 520 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 FAM47AQ5JRC9 791 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 C12orf60Q5U649 245 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ARL6IP4Q66PJ3 421 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 FAM196AQ6ZSG2 479 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 MYH14Q7Z406 1995 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ZAR1Q86SH2 424 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 KIF18AQ8NI77 898 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ANKS1AQ92625 1134 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 DHX58Q96C10 678 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 C16orf45Q96MC5 204 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ROBO3Q96MS0 1386 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 CLIC6Q96NY7 704 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 OSBPL1AQ9BXW6 950 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 XPO4Q9C0E2 1151 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 ACSS3Q9H6R3 686 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 TCP11L1Q9NUJ3 509 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 PRKAG2Q9UGJ0 569 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 THSD7AQ9UPZ6 1657 aa6.63□□□□□ -1.35
ATPAF1-204ENST00000474020 BTAF1O14981 1849 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 CYP2D7A0A087X1C5 515 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 hCG_1984214I3L0E3 225 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PLEKHA8P1O95397 391 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 MYL1P05976 194 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PARP1P09874 1014 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 RAB6AP20340 208 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 YY1P25490 414 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 GNA11P29992 359 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 ATP2C1P98194 919 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PPP2R3AQ06190 1150 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 SPAG1Q07617 926 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 LRMPQ12912 555 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 ORC2Q13416 577 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 GRM4Q14833 912 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 SYCP1Q15431 976 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 LONRF3Q496Y0 759 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 METTL16Q86W50 562 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PPFIBP1Q86W92 1011 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 ZSCAN29Q8IWY8 852 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 TEX11Q8IYF3 940 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 BLIDQ8IZY5 108 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 ZNF713Q8N859 430 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 ENOX1Q8TC92 643 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 CACTINQ8WUQ7 758 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 RRP36Q96EU6 259 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 GSDMAQ96QA5 445 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 CRAMP1Q96RY5 1269 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms