RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 CHMP4BP1P59074 171 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 DNM1Q05193 864 aaKnown RBP16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 FAAP100Q0VG06 881 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 HIC1Q14526 733 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 GRIK4Q16099 956 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 PTGISQ16647 500 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 CKAP2LQ8IYA6 745 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 KCNG4Q8TDN1 519 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 TRMT13Q9NUP7 481 aaKnown RBP16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 INSRRP14616 1297 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 KRT85P78386 507 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 RBL2Q08999 1139 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 STK38Q15208 465 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 ZNF484Q5JVG2 852 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 MARCH8Q5T0T0 291 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 KRT79Q5XKE5 535 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 SERINC5Q86VE9 423 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 NIFKQ9BYG3 293 aaKnown RBP16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 TRPV6Q9H1D0 765 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 SEMA6BQ9H3T3 888 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 NRBP2Q9NSY0 501 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 SETD4Q9NVD3 440 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 TBX21Q9UL17 535 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 PPME1Q9Y570 386 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
CDC42SE1-203ENST00000470278 KDM3AQ9Y4C1 1321 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 SPTLC2O15270 562 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 MED24O75448 989 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 YWHABP31946 246 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 PTK7Q13308 1070 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 CTTNQ14247 550 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 HYIQ5T013 277 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 ANO5Q75V66 913 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 KRI1Q8N9T8 703 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 PPP1R13LQ8WUF5 828 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 TFIP11Q9UBB9 837 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 PRKAG2Q9UGJ0 569 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 SEPT9Q9UHD8 586 aaPredicted RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 TUBE1Q9UJT0 475 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 NOD1Q9Y239 953 aa16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 TRIP12Q14669 1992 aaPredicted RBP16.71■□□□□ 0.27
CDC42SE1-203ENST00000470278 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 RPLP2P05387 115 aaKnown RBP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 SMAD3P84022 425 aaKnown RBP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 GRIN1Q05586 938 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 ZNF697Q5TEC3 545 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 TAF2Q6P1X5 1199 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 TPH2Q8IWU9 490 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 CAGE1Q8TC20 777 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 MYLIPQ8WY64 445 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 TCHHQ07283 1943 aa16.7■□□□□ 0.26
CDC42SE1-203ENST00000470278 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 TREHO43280 583 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 CAND2O75155 1236 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 C22orf31O95567 290 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 ZNF200P98182 395 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 POTEGQ6S5H5 508 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 C16orf59Q7L2K0 433 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 OTUD6AQ7L8S5 288 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 RPAINQ86UA6 219 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 CYP26B1Q9NR63 512 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 DBR1Q9UK59 544 aaKnown RBP16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 PCDHA2Q9Y5H9 948 aa16.69■□□□□ 0.26
CDC42SE1-203ENST00000470278 MAGEB2O15479 319 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 CDC25AP30304 524 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 IGBP1P78318 339 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 ECM1Q16610 540 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 TRIM71Q2Q1W2 868 aaKnown RBP16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 MTHFD1LQ6UB35 978 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 TRAPPC12Q8WVT3 735 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 DHX38Q92620 1227 aaKnown RBP16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 NOC4LQ9BVI4 516 aaKnown RBP16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
CDC42SE1-203ENST00000470278 TMEM39AQ9NV64 488 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms