RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 PCDHA8Q9Y5H6 950 aa13.97□□□□□ -0.17
UBR4-211ENST00000467272 FRYLO94915 3013 aa13.97□□□□□ -0.17
UBR4-211ENST00000467272 MEIS1O00470 390 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.17
UBR4-211ENST00000467272 CCNE2O96020 404 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 GNAQP50148 359 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 SLC26A2P50443 739 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 STAT5BP51692 787 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 PLCB3Q01970 1234 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 TMEM266Q2M3C6 531 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 FAM102BQ5T8I3 360 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 TYW1BQ6NUM6 668 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 ABHD15Q6UXT9 468 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 SLC24A5Q71RS6 500 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
UBR4-211ENST00000467272 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.17
UBR4-211ENST00000467272 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
UBR4-211ENST00000467272 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
UBR4-211ENST00000467272 RNF19AQ9NV58 838 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 TYW1Q9NV66 732 aaKnown RBP13.96□□□□□ -0.17
UBR4-211ENST00000467272 PKD2L1Q9P0L9 805 aa13.96□□□□□ -0.17
UBR4-211ENST00000467272 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 PTPRZ1P23471 2315 aaPredicted RBP13.95□□□□□ -0.18
UBR4-211ENST00000467272 DHX15O43143 795 aaKnown RBP13.95□□□□□ -0.18
UBR4-211ENST00000467272 ARP10275 920 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 ATP4AP20648 1035 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 LIFRP42702 1097 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 FUT2Q10981 343 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 LRRC55Q6ZSA7 311 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 CRYGNQ8WXF5 182 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 TNPO1Q92973 898 aaKnown RBP13.95□□□□□ -0.18
UBR4-211ENST00000467272 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 NEK1Q96PY6 1258 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 AZI2Q9H6S1 392 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 ELAC1Q9H777 363 aaKnown RBP13.95□□□□□ -0.18
UBR4-211ENST00000467272 AGO4Q9HCK5 861 aaKnown RBP13.95□□□□□ -0.18
UBR4-211ENST00000467272 C1orf112Q9NSG2 853 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
UBR4-211ENST00000467272 ST3GAL5Q9UNP4 418 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 DNAH14Q0VDD8 3507 aa13.95□□□□□ -0.18
UBR4-211ENST00000467272 PPFIA3O75145 1194 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 GPR32O75388 356 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 PDGFBP01127 241 aaPredicted RBP13.94□□□□□ -0.18
UBR4-211ENST00000467272 KLRC1P26715 233 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 FNDC1Q4ZHG4 1894 aaPredicted RBP13.94□□□□□ -0.18
UBR4-211ENST00000467272 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 RIPOR3Q96MK2 946 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 ADAM2Q99965 735 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 PCDHB7Q9Y5E2 793 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 COL1A2P08123 1366 aa13.94□□□□□ -0.18
UBR4-211ENST00000467272 DMXL1Q9Y485 3027 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 FAM186AA6NE01 2351 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 SPDYE3A6NKU9 549 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 M0QZ92 97 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 PRC1O43663 620 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 GFRA3O60609 400 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 C22orf31O95567 290 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
UBR4-211ENST00000467272 CLK2P49760 499 aaKnown RBP13.93□□□□□ -0.18
UBR4-211ENST00000467272 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 TMTC2Q8N394 836 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 LINC01465Q8N7H1 131 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
UBR4-211ENST00000467272 CASD1Q96PB1 797 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 AAASQ9NRG9 546 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 FAM86C1Q9NVL1 165 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 TMEM260Q9NX78 707 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 LRFN2Q9ULH4 789 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
UBR4-211ENST00000467272 IGLV3-22A0A075B6J6 115 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 GALR2O43603 387 aaPredicted RBP13.92□□□□□ -0.18
UBR4-211ENST00000467272 HBP1O60381 514 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 RPS6KA5O75582 802 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 FGFR1P11362 822 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 RXRAP19793 462 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 SREBF1P36956 1147 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
UBR4-211ENST00000467272 NFX1Q12986 1120 aaKnown RBP13.92□□□□□ -0.18
UBR4-211ENST00000467272 WWC2Q6AWC2 1192 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 NIPA1Q7RTP0 329 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 CCDC60Q8IWA6 550 aaPredicted RBP13.92□□□□□ -0.18
UBR4-211ENST00000467272 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 TMEM87BQ96K49 555 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 IRF2BPLQ9H1B7 796 aa13.92□□□□□ -0.18
UBR4-211ENST00000467272 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
UBR4-211ENST00000467272 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
UBR4-211ENST00000467272 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms