RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ATP8B4Q8TF62 1192 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 CUL5Q93034 780 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 NT5C3AQ9H0P0 336 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 ARMCX3Q9UH62 379 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 PNMA6FA0A0J9YX94 578 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 GFPT2O94808 682 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 SHBGP04278 402 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 EPHA7Q15375 998 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 CALR3Q96L12 384 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 KDM3AQ9Y4C1 1321 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 FRMD3A2A2Y4 597 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 FGGP02679 453 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 GPSM2P81274 684 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 BIRC3Q13489 604 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 EDRF1Q3B7T1 1238 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 RASGEF1CQ8N431 466 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 REEP2Q9BRK0 252 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 PNMA2Q9UL42 364 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 GNPATO15228 680 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 CAND2O75155 1236 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 GALCP54803 685 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 ZNF543Q08ER8 600 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 PRPF4BQ13523 1007 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 GIT2Q14161 759 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 RUFY4Q6ZNE9 571 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.78□□□□□ -0.363e-8■■■■□ 22.1
PDZRN3-203ENST00000462146 PSTPIP2Q9H939 334 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 GCNT4Q9P109 453 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 PPP1R9AQ9ULJ8 1098 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 RAD21O60216 631 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 FLOT1O75955 427 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 XRCC5P13010 732 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 TAL1P17542 331 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 ABCB4P21439 1286 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 POLD1P28340 1107 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 JAM2P57087 298 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 POU5F1Q01860 360 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 C10orf76Q5T2E6 689 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 AGBL2Q5U5Z8 902 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 AADACL2Q6P093 401 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 CATSPER3Q86XQ3 398 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 EIF1ADQ8N9N8 165 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 TATDN2Q93075 761 aa12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-203ENST00000462146 ASTN1O14525 1302 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 C5orf60A6NFR6 353 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 SRRM3A6NNA2 597 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 F8W031 263 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 CCDC188H7C350 402 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 CHUKO15111 745 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 PRKCIP41743 596 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 SCTRP47872 440 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 PLCB4Q15147 1175 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 KNOP1Q1ED39 458 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 CYB5D1Q6P9G0 228 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 HES6Q96HZ4 224 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 PSMD1Q99460 953 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 EPB41L4BQ9H329 900 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 SUCLA2Q9P2R7 463 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 ADAMTSL1Q8N6G6 1762 aa12.77□□□□□ -0.36
PDZRN3-203ENST00000462146 SMIM23A6NLE4 172 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 UFL1O94874 794 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 DRD4P21917 467 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 GRAPQ13588 217 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 IFI16Q16666 785 aaKnown RBP12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 GLYCTKQ8IVS8 523 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 GLG1Q92896 1179 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 KCNMB3Q9NPA1 279 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 DDX4Q9NQI0 724 aaKnown RBP12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
PDZRN3-203ENST00000462146 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 SNAP25P60880 206 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 IFFO1Q0D2I5 559 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 MTMR3Q13615 1198 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 SHROOM1Q2M3G4 852 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 SLC30A10Q6XR72 485 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
PDZRN3-203ENST00000462146 CPLX4Q7Z7G2 160 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms