RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TBC1D10BQ4KMP7 808 aaPredicted RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 AADACL2Q6P093 401 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 KCNV1Q6PIU1 500 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 G3V3G9 751 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 DDX3XO00571 662 aaKnown RBP eCLIP21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 FGGP02679 453 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 TRIM49P0CI25 452 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 TRIM49CP0CI26 452 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZNF76P36508 570 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 ITGB3BPQ13352 177 aaPredicted RBP21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 DCAF8Q5TAQ9 597 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 ATP8A1Q9Y2Q0 1164 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 H2AFZP0C0S5 128 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 CYP2J2P51589 502 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 SLFN13Q68D06 897 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 CDC42EP5Q6NZY7 148 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 H2AFVQ71UI9 128 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 RUBCNQ92622 972 aa21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 ATF5Q9Y2D1 282 aaPredicted RBP21.35■■□□□ 1.01
CNEP1R1-203ENST00000458059 TMEM110-MUSTN1A8MSY1 372 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 SPATA31C1P0DKV0 1188 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZNF844Q08AG5 666 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 MMS22LQ6ZRQ5 1243 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 LRRC57Q8N9N7 239 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 MDM1Q8TC05 714 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 ISCUQ9H1K1 167 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 KCNMB3Q9NPA1 279 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 IGKV6D-41A0A0C4DH26 115 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 MEIS2O14770 477 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 TBCAO75347 108 aaKnown RBP21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 FLOT1O75955 427 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 GALCP54803 685 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 DHX9Q08211 1270 aaKnown RBP21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 SEPT2Q15019 361 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 KIAA0825Q8IV33 1275 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 TPH2Q8IWU9 490 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 LRRC4BQ9NT99 713 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 IGSF9BQ9UPX0 1349 aa21.34■■□□□ 1.01
CNEP1R1-203ENST00000458059 EML1O00423 815 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 GCFC2P16383 781 aaKnown RBP21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 KRT71Q3SY84 523 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 CNOT8Q9UFF9 292 aaKnown RBP21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 TLDC2A0PJX2 215 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 MEFVO15553 781 aaPredicted RBP21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 NOVP48745 357 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 QPCTQ16769 361 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 GPATCH4Q5T3I0 446 aaKnown RBP21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 B4GALNT4Q76KP1 1039 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 PALB2Q86YC2 1186 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 GLG1Q92896 1179 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 SLC35C1Q96A29 364 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 RBM17Q96I25 401 aaKnown RBP21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.33■■□□□ 1.017e-7■■□□□ 13.4
CNEP1R1-203ENST00000458059 DNAJC18Q9H819 358 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 TMBIM4Q9HC24 238 aa21.33■■□□□ 1.01
CNEP1R1-203ENST00000458059 SMCHD1A6NHR9 2005 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 HSPA9P38646 679 aaKnown RBP21.33■■□□□ 1
CNEP1R1-203ENST00000458059 EPHA7Q15375 998 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 DPY19L2P1Q6NXN4 242 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 MYCT1Q8N699 235 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 TBC1D22AQ8WUA7 517 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 TAS2R14Q9NYV8 317 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 TMOD4Q9NZQ9 345 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 PPP1R9AQ9ULJ8 1098 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 ASTN1O14525 1302 aa21.33■■□□□ 1
CNEP1R1-203ENST00000458059 SPDYE3A6NKU9 549 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 EVI5O60447 810 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 BUB1BO60566 1050 aaPredicted RBP21.32■■□□□ 1
CNEP1R1-203ENST00000458059 NT5C2P49902 561 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 MAGOHP61326 146 aaKnown RBP21.32■■□□□ 1
CNEP1R1-203ENST00000458059 GPATCH11Q8N954 259 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 SCFD2Q8WU76 684 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 MAGOHBQ96A72 148 aaKnown RBP21.32■■□□□ 1
CNEP1R1-203ENST00000458059 SIX2Q9NPC8 291 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 HLA-DOAP06340 250 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 EDRF1Q3B7T1 1238 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 LNX1Q8TBB1 728 aaPredicted RBP21.32■■□□□ 1
CNEP1R1-203ENST00000458059 FAM163AQ96GL9 167 aaPredicted RBP21.32■■□□□ 1
CNEP1R1-203ENST00000458059 DBNDD1Q9H9R9 158 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 PKD2L1Q9P0L9 805 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 TMEM59LQ9UK28 342 aa21.32■■□□□ 1
CNEP1R1-203ENST00000458059 PDE4CQ08493 712 aa21.31■■□□□ 1
CNEP1R1-203ENST00000458059 SPIRE1Q08AE8 756 aa21.31■■□□□ 1
CNEP1R1-203ENST00000458059 IFFO1Q0D2I5 559 aa21.31■■□□□ 1
CNEP1R1-203ENST00000458059 SF3B2Q13435 895 aaKnown RBP21.31■■□□□ 1
CNEP1R1-203ENST00000458059 SPRED3Q2MJR0 410 aa21.31■■□□□ 1
CNEP1R1-203ENST00000458059 IPO4Q8TEX9 1081 aaKnown RBP21.31■■□□□ 1
CNEP1R1-203ENST00000458059 ZC3H12CQ9C0D7 883 aaKnown RBP21.31■■□□□ 1
CNEP1R1-203ENST00000458059 HMGB1P1B2RPK0 211 aaPredicted RBP21.31■■□□□ 1
CNEP1R1-203ENST00000458059 MARSP56192 900 aaKnown RBP21.31■■□□□ 1
CNEP1R1-203ENST00000458059 HYIQ5T013 277 aa21.31■■□□□ 1
CNEP1R1-203ENST00000458059 DDTLA6NHG4 134 aaPredicted RBP21.3■■□□□ 1
CNEP1R1-203ENST00000458059 PHF20L1A8MW92 1017 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 CALUO43852 315 aaPredicted RBP21.3■■□□□ 1
CNEP1R1-203ENST00000458059 VPS36Q86VN1 386 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 SLC35G2Q8TBE7 412 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 ETNPPLQ8TBG4 499 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 SH2D3AQ9BRG2 576 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 MSH4O15457 936 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms