RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 ABCC6O95255 1503 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 FOXB2Q5VYV0 432 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 TTC1Q99614 292 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 CCDC166P0CW27 439 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 FGFR4P22455 802 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 HOXD12P35452 270 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 UBA7P41226 1012 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 TBL3Q12788 808 aaKnown RBP17.11■□□□□ 0.33
SIK3-205ENST00000446921 KPNB1Q14974 876 aaKnown RBP17.11■□□□□ 0.33
SIK3-205ENST00000446921 SCUBE1Q8IWY4 988 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 MB21D2Q8IYB1 491 aaPredicted RBP17.11■□□□□ 0.33
SIK3-205ENST00000446921 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.335e-8■■■■■ 65.3
SIK3-205ENST00000446921 PURBQ96QR8 312 aaKnown RBP17.11■□□□□ 0.33
SIK3-205ENST00000446921 TBC1D10AQ9BXI6 508 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 CBX6O95503 412 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 ITGA4P13612 1032 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
SIK3-205ENST00000446921 ASIC1P78348 528 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 EAPPQ56P03 285 aaPredicted RBP17.1■□□□□ 0.33
SIK3-205ENST00000446921 ISLR2Q6UXK2 745 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
SIK3-205ENST00000446921 AGBL1Q96MI9 1066 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 COMMD3-BMI1R4GMX3 469 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 DKC1O60832 514 aaKnown RBP eCLIP17.1■□□□□ 0.33
SIK3-205ENST00000446921 BAG3O95817 575 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 ITGA2BP08514 1039 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
SIK3-205ENST00000446921 PDE4DQ08499 809 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 INAQ16352 499 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 TRIM67Q6ZTA4 783 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
SIK3-205ENST00000446921 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 NOC2LQ9Y3T9 749 aaKnown RBP17.1■□□□□ 0.33
SIK3-205ENST00000446921 NPATQ14207 1427 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 PRDM1O75626 825 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 GNAZP19086 355 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 INHBCP55103 352 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 CDR2Q01850 454 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 CYLC2Q14093 348 aaPredicted RBP17.1■□□□□ 0.33
SIK3-205ENST00000446921 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 NAPBQ9H115 298 aa17.1■□□□□ 0.33
SIK3-205ENST00000446921 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 DNAJC6O75061 913 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
SIK3-205ENST00000446921 IDH1O75874 414 aaKnown RBP17.09■□□□□ 0.33
SIK3-205ENST00000446921 LMNB1P20700 586 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 COPB2P35606 906 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 RTP1P59025 263 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 ZBTB17Q13105 803 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 MYLK2Q9H1R3 596 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 MAPK13O15264 365 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 KRT36O76013 467 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 MARK3P27448 753 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 LIN52Q52LA3 116 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 KLC3Q6P597 504 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 LRRC74BQ6ZQY2 392 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 SMYD1Q8NB12 490 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 CFAP61Q8NHU2 1237 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
SIK3-205ENST00000446921 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 DENND2DQ9H6A0 471 aaPredicted RBP17.09■□□□□ 0.33
SIK3-205ENST00000446921 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 TMEM247A6NEH6 219 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 ACSL3O95573 720 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
SIK3-205ENST00000446921 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
SIK3-205ENST00000446921 ZNF662Q6ZS27 426 aa17.09■□□□□ 0.33
SIK3-205ENST00000446921 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 ATP5HO75947 161 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 PENKP01210 267 aaPredicted RBP17.08■□□□□ 0.33
SIK3-205ENST00000446921 KLHL30Q0D2K2 578 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 ZNF394Q53GI3 561 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 TTC38Q5R3I4 469 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 SPATA20Q8TB22 786 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 SH3GL1Q99961 368 aa17.08■□□□□ 0.33
SIK3-205ENST00000446921 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.33
SIK3-205ENST00000446921 BICDL2A1A5D9 508 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 MAGEB3O15480 346 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 WFS1O76024 890 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 AGTP01019 485 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 VAV1P15498 845 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 CCNG1P51959 295 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 EPHA10Q5JZY3 1008 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 C6orf163Q5TEZ5 329 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 ZNF572Q7Z3I7 529 aaPredicted RBP17.08■□□□□ 0.32
SIK3-205ENST00000446921 FOXP1Q9H334 677 aaPredicted RBP17.08■□□□□ 0.32
SIK3-205ENST00000446921 BTBD7Q9P203 1132 aa17.08■□□□□ 0.32
SIK3-205ENST00000446921 RFX7Q2KHR2 1363 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms