RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SH3GLB2Q9NR46 395 aa23.83■■□□□ 1.41
VSX1-206ENST00000444511 MAFBQ9Y5Q3 323 aaPredicted RBP23.83■■□□□ 1.41
VSX1-206ENST00000444511 ZBTB42B2RXF5 422 aa23.82■■□□□ 1.4
VSX1-206ENST00000444511 RPS6KA5O75582 802 aa23.82■■□□□ 1.4
VSX1-206ENST00000444511 EP400NLQ6ZTU2 488 aa23.82■■□□□ 1.4
VSX1-206ENST00000444511 CMTR2Q8IYT2 770 aaKnown RBP23.82■■□□□ 1.4
VSX1-206ENST00000444511 GABBR1Q9UBS5 961 aa23.82■■□□□ 1.4
VSX1-206ENST00000444511 LRFN2Q9ULH4 789 aa23.82■■□□□ 1.4
VSX1-206ENST00000444511 RALGAPA2Q2PPJ7 1873 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 NCOR1O75376 2440 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 CPLX1O14810 134 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 GRM6O15303 877 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 C22orf31O95567 290 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 IBSPP21815 317 aaPredicted RBP23.81■■□□□ 1.4
VSX1-206ENST00000444511 SSRP1Q08945 709 aaKnown RBP23.81■■□□□ 1.4
VSX1-206ENST00000444511 ODR4Q5SWX8 454 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 FAM43BQ6ZT52 329 aaPredicted RBP23.81■■□□□ 1.4
VSX1-206ENST00000444511 CRIPAKQ8N1N5 446 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 METTL13Q8N6R0 699 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.81■■□□□ 1.4
VSX1-206ENST00000444511 LENG9Q96B70 501 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 PLVAPQ9BX97 442 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 C1QTNF1Q9BXJ1 281 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 TMX1Q9H3N1 280 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 CDHR5Q9HBB8 845 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 CEP131Q9UPN4 1083 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 NOC2LQ9Y3T9 749 aaKnown RBP23.81■■□□□ 1.4
VSX1-206ENST00000444511 MRPL42Q9Y6G3 142 aaKnown RBP23.81■■□□□ 1.4
VSX1-206ENST00000444511 BDP1A6H8Y1 2624 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 NLRC5Q86WI3 1866 aa23.81■■□□□ 1.4
VSX1-206ENST00000444511 WDR64B1ANS9 1081 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 COL9A1P20849 921 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 USP11P51784 963 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 TTC3P53804 2025 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 PAN2Q504Q3 1202 aaKnown RBP23.8■■□□□ 1.4
VSX1-206ENST00000444511 PTCRAQ6ISU1 281 aaPredicted RBP23.8■■□□□ 1.4
VSX1-206ENST00000444511 PABPC5Q96DU9 382 aaKnown RBP23.8■■□□□ 1.4
VSX1-206ENST00000444511 FAM167AQ96KS9 214 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 PPP1R16BQ96T49 567 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 ERVK-5Q9HDB9 667 aa23.8■■□□□ 1.4
VSX1-206ENST00000444511 DENND3A2RUS2 1198 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 H3BQ06 376 aaPredicted RBP23.79■■□□□ 1.4
VSX1-206ENST00000444511 NEFLP07196 543 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 KIZQ2M2Z5 673 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 PUS10Q3MIT2 529 aaKnown RBP23.79■■□□□ 1.4
VSX1-206ENST00000444511 CPLX2Q6PUV4 134 aaKnown RBP23.79■■□□□ 1.4
VSX1-206ENST00000444511 NEK9Q8TD19 979 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 TMEM40Q8WWA1 233 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 ZNF274Q96GC6 653 aaPredicted RBP23.79■■□□□ 1.4
VSX1-206ENST00000444511 C22orf23Q9BZE7 217 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 UPF3BQ9BZI7 483 aaKnown RBP23.79■■□□□ 1.4
VSX1-206ENST00000444511 TM6SF1Q9BZW5 370 aa23.79■■□□□ 1.4
VSX1-206ENST00000444511 GPR182O15218 404 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 MSH4O15457 936 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 GAS7O60861 476 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 CSPG5O95196 566 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 DEXIO95424 95 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 SARSP49591 514 aaKnown RBP23.78■■□□□ 1.4
VSX1-206ENST00000444511 CRYBB1P53674 252 aaPredicted RBP23.78■■□□□ 1.4
VSX1-206ENST00000444511 TBCKQ8TEA7 893 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 RIT2Q99578 217 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 OSMRQ99650 979 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 LARP6Q9BRS8 491 aaKnown RBP23.78■■□□□ 1.4
VSX1-206ENST00000444511 ALG13Q9NP73 1137 aaKnown RBP23.78■■□□□ 1.4
VSX1-206ENST00000444511 DISC1Q9NRI5 854 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 RNF216Q9NWF9 866 aaPredicted RBP23.78■■□□□ 1.4
VSX1-206ENST00000444511 CLDND1Q9NY35 253 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 PCDHA4Q9UN74 947 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 ST3GAL5Q9UNP4 418 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 PCDHB7Q9Y5E2 793 aa23.78■■□□□ 1.4
VSX1-206ENST00000444511 MAGEB2O15479 319 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 CHMP2AO43633 222 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 NCK2O43639 380 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 MMP1P03956 469 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 VTNP04004 478 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 IL9P15248 144 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 STK3Q13188 491 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 LRCH2Q5VUJ6 765 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 P2RX5Q93086 422 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 ADAM2Q99965 735 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 TEKT3Q9BXF9 490 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 C1orf112Q9NSG2 853 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 NRBP2Q9NSY0 501 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 PLAGL2Q9UPG8 496 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 BRWD1Q9NSI6 2320 aa23.77■■□□□ 1.4
VSX1-206ENST00000444511 GRXCR2A6NFK2 248 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 EDIL3O43854 480 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 MGEA5O60502 916 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 OATP04181 439 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 SFNP31947 248 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 GATMP50440 423 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 CLCN3P51790 818 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 JAK3P52333 1124 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 COL19A1Q14993 1142 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 NAALADL2Q58DX5 795 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 SLC24A5Q71RS6 500 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 FAM178BQ8IXR5 827 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 SLC5A5Q92911 643 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 MAP7D2Q96T17 732 aa23.76■■□□□ 1.39
VSX1-206ENST00000444511 EPHX3Q9H6B9 360 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms