RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SSTR3P32745 418 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-219ENST00000440240 PKN1Q16512 942 aa23.54■■□□□ 1.36
CPNE1-219ENST00000440240 ZNF746Q6NUN9 644 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-219ENST00000440240 CKAP2LQ8IYA6 745 aa23.54■■□□□ 1.36
CPNE1-219ENST00000440240 SMAP1Q8IYB5 467 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-219ENST00000440240 BBXQ8WY36 941 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-219ENST00000440240 KHSRPQ92945 711 aaKnown RBP eCLIP23.54■■□□□ 1.368e-8■■■□□ 15.7
CPNE1-219ENST00000440240 PLAGL2Q9UPG8 496 aa23.54■■□□□ 1.36
CPNE1-219ENST00000440240 GINS2Q9Y248 185 aa23.54■■□□□ 1.36
CPNE1-219ENST00000440240 MAFBQ9Y5Q3 323 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-219ENST00000440240 NLRC5Q86WI3 1866 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 RPS6KA5O75582 802 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 RPS6KB1P23443 525 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 CTC1Q2NKJ3 1217 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 AGXT2Q9BYV1 514 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 TMX1Q9H3N1 280 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 ALG13Q9NP73 1137 aaKnown RBP23.53■■□□□ 1.36
CPNE1-219ENST00000440240 PCDHB7Q9Y5E2 793 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 PCDHA10Q9Y5I2 948 aa23.53■■□□□ 1.36
CPNE1-219ENST00000440240 MRPL42Q9Y6G3 142 aaKnown RBP23.53■■□□□ 1.36
CPNE1-219ENST00000440240 NID2Q14112 1375 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 GPR182O15218 404 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 PSAPP07602 524 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 ATP4AP20648 1035 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 CIITAP33076 1130 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 SARSP49591 514 aaKnown RBP23.52■■□□□ 1.36
CPNE1-219ENST00000440240 TMEM266Q2M3C6 531 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 PRR16Q569H4 304 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 CCDC148Q8NFR7 591 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 PPP2R3CQ969Q6 453 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 RNF26Q9BY78 433 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-219ENST00000440240 ERVK-5Q9HDB9 667 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 PRKAG3Q9UGI9 489 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 CEP131Q9UPN4 1083 aa23.52■■□□□ 1.36
CPNE1-219ENST00000440240 REC8O95072 547 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 ALADP13716 330 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 CRYBB1P53674 252 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-219ENST00000440240 HYAL1Q12794 435 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 PHKBQ93100 1093 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 UIMC1Q96RL1 719 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 CDHR5Q9HBB8 845 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 C1orf112Q9NSG2 853 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 ST3GAL5Q9UNP4 418 aa23.51■■□□□ 1.35
CPNE1-219ENST00000440240 NOC2LQ9Y3T9 749 aaKnown RBP23.51■■□□□ 1.35
CPNE1-219ENST00000440240 DENND3A2RUS2 1198 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 ZBTB42B2RXF5 422 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 ADAMTS3O15072 1205 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 LTBRP36941 435 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 NTRK3Q16288 839 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 PAN2Q504Q3 1202 aaKnown RBP23.5■■□□□ 1.35
CPNE1-219ENST00000440240 SLC24A5Q71RS6 500 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 ADAM2Q99965 735 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 RGS18Q9NS28 235 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 ARIH1Q9Y4X5 557 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-219ENST00000440240 SAMM50Q9Y512 469 aa23.5■■□□□ 1.35
CPNE1-219ENST00000440240 MAGEB2O15479 319 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 C22orf31O95567 290 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 ITGB1P05556 798 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 IFNAR1P17181 557 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 EVCP57679 992 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 CAMK1Q14012 370 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 ZNF710Q8N1W2 664 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 METTL13Q8N6R0 699 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 KLHL23Q8NBE8 558 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 SPPL3Q8TCT6 385 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 TMEM40Q8WWA1 233 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 FAM167AQ96KS9 214 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 SLC26A6Q9BXS9 759 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 IGFLR1Q9H665 355 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 GABBR1Q9UBS5 961 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 HCN4Q9Y3Q4 1203 aa23.49■■□□□ 1.35
CPNE1-219ENST00000440240 PDIA3P30101 505 aaKnown RBP23.48■■□□□ 1.35
CPNE1-219ENST00000440240 USP11P51784 963 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 KIZQ2M2Z5 673 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 TRMT1LQ7Z2T5 733 aaKnown RBP23.48■■□□□ 1.35
CPNE1-219ENST00000440240 FAM122AQ96E09 287 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 CCDC136Q96JN2 1154 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 SH3GLB2Q9NR46 395 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 AAASQ9NRG9 546 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 NRBP2Q9NSY0 501 aa23.48■■□□□ 1.35
CPNE1-219ENST00000440240 WDR64B1ANS9 1081 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 TMOD1P28289 359 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 PLA2G5P39877 138 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 ADAM15Q13444 863 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 ADHFE1Q8IWW8 467 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 RASGRP4Q8TDF6 673 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 C11orf16Q9NQ32 467 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 PCDHB12Q9Y5F1 795 aa23.47■■□□□ 1.35
CPNE1-219ENST00000440240 C9IYK1 514 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 EPB41L2O43491 1005 aaKnown RBP23.46■■□□□ 1.35
CPNE1-219ENST00000440240 MGEA5O60502 916 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 GPR32O75388 356 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 IBSPP21815 317 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-219ENST00000440240 DNAJB1P25685 340 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 GATMP50440 423 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 CCT2P78371 535 aaKnown RBP23.46■■□□□ 1.35
CPNE1-219ENST00000440240 ZP2Q05996 745 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 DLX2Q07687 328 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-219ENST00000440240 SMAD2Q15796 467 aaKnown RBP23.46■■□□□ 1.35
CPNE1-219ENST00000440240 TRIM22Q8IYM9 498 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms