RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 UBE3CQ15386 1083 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 ZC3H12BQ5HYM0 836 aaKnown RBP14.77□□□□□ -0.04
LRCH3-206ENST00000438796 THEMIS2Q5TEJ8 643 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 PCDHA13Q9Y5I0 950 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 UBA6A0AVT1 1052 aaPredicted RBP14.77□□□□□ -0.04
LRCH3-206ENST00000438796 APOA5Q6Q788 366 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 CYFIP1Q7L576 1253 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 TTC17Q96AE7 1141 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 CPVLQ9H3G5 476 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 SYF2O95926 243 aaKnown RBP14.77□□□□□ -0.04
LRCH3-206ENST00000438796 PYGLP06737 847 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 CRKP46108 304 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 ZNF699Q32M78 642 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 RAPGEF5Q92565 580 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 RMDN3Q96TC7 470 aa14.77□□□□□ -0.04
LRCH3-206ENST00000438796 DFFAO00273 331 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 ZSCAN9O15535 394 aaPredicted RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 CLDN3O15551 220 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 E2F6O75461 281 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 SNRNP48Q6IEG0 339 aaKnown RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 TRAIPQ9BWF2 469 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 ZSWIM5Q9P217 1185 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 SLC4A7Q9Y6M7 1214 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 DHX9Q08211 1270 aaKnown RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 TAS2R42Q7RTR8 314 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 RTKN2Q8IZC4 609 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 GPT2Q8TD30 523 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 DHTKD1Q96HY7 919 aaPredicted RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 PPP1R36Q96LQ0 422 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 FAM213AQ9BRX8 229 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 TM6SF1Q9BZW5 370 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 BLMP54132 1417 aaPredicted RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 CPB1P15086 417 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 GPC3P51654 580 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 FAM117BQ6P1L5 589 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 DHX38Q92620 1227 aaKnown RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 SAMSN1Q9NSI8 373 aaKnown RBP14.77□□□□□ -0.05
LRCH3-206ENST00000438796 KIF17Q9P2E2 1029 aa14.77□□□□□ -0.05
LRCH3-206ENST00000438796 PNMA6FA0A0J9YX94 578 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 HUS1O60921 280 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 PLEKHA8P1O95397 391 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 DPCR1Q3MIW9 517 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 SLC10A5Q5PT55 438 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 KRT80Q6KB66 452 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 TRIM42Q8IWZ5 723 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 EGFL8Q99944 293 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 SPON2Q9BUD6 331 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 SIK2Q9H0K1 926 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 TAC1P20366 129 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 ZNF667Q5HYK9 610 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 ZBTB18Q99592 522 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 PGRMC1O00264 195 aaKnown RBP14.76□□□□□ -0.05
LRCH3-206ENST00000438796 CYP2D6P10635 497 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 HSPA6P17066 643 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 AIFM3Q96NN9 605 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 EFHD1Q9BUP0 239 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 SP110Q9HB58 689 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 PCDHA6Q9UN73 950 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 PCDHA8Q9Y5H6 950 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 BRD1O95696 1058 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 ZMYM1Q5SVZ6 1142 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 AK8Q96MA6 479 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 BHMT2Q9H2M3 363 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 DHX36Q9H2U1 1008 aaKnown RBP14.76□□□□□ -0.05
LRCH3-206ENST00000438796 CASS4Q9NQ75 786 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 DYRK4Q9NR20 520 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 PCDHB6Q9Y5E3 794 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 ATP10AO60312 1499 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 NFKBIAP25963 317 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 MAP2K2P36507 400 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 TAGAPQ8N103 731 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 USP17L5A8MUK1 530 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
LRCH3-206ENST00000438796 LCP1P13796 627 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 STXBP2Q15833 593 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 TAF1BQ53T94 588 aaPredicted RBP14.76□□□□□ -0.05
LRCH3-206ENST00000438796 ATXN7L3BQ96GX2 97 aa14.76□□□□□ -0.05
LRCH3-206ENST00000438796 TTC7AQ9ULT0 858 aaPredicted RBP14.76□□□□□ -0.05
LRCH3-206ENST00000438796 RASSF3Q86WH2 238 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 SSH3Q8TE77 659 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 ULK4Q96C45 1275 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 DNAJC8O75937 253 aaPredicted RBP14.75□□□□□ -0.05
LRCH3-206ENST00000438796 SERPING1P05155 500 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 IRF1P10914 325 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 IL6STP40189 918 aaPredicted RBP14.75□□□□□ -0.05
LRCH3-206ENST00000438796 CCDC85BQ15834 202 aaPredicted RBP14.75□□□□□ -0.05
LRCH3-206ENST00000438796 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 RAET1EQ8TD07 263 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 ZFYVE19Q96K21 471 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 SAYSD1Q9NPB0 183 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 ARAP3Q8WWN8 1544 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 GTPBP10A4D1E9 387 aaKnown RBP14.75□□□□□ -0.05
LRCH3-206ENST00000438796 ECE2O60344 883 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 MMP1P03956 469 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 TMED1Q13445 227 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 SLFNL1Q499Z3 407 aa14.75□□□□□ -0.05
LRCH3-206ENST00000438796 RNF26Q9BY78 433 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms