RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ESYT3A0FGR9 886 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 C1QTNF3-AMACRE9PGA6 284 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 FOXP2O15409 715 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 MAFO75444 373 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZNF888P0CJ79 500 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 SDSP20132 328 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 USP10Q14694 798 aaKnown RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 TRIM68Q6AZZ1 485 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 RALYLQ86SE5 291 aaKnown RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 DDX53Q86TM3 631 aaKnown RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 BOCQ9BWV1 1114 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 INTS7Q9NVH2 962 aaKnown RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 UCKL1Q9NWZ5 548 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 SAMD15Q9P1V8 674 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 FBXO10Q9UK96 956 aa4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
HMGB3P12-201ENST00000438745 ARAP1Q96P48 1450 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 FAM83GA6ND36 823 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 PATE3B3GLJ2 98 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 M0R2C6 588 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 GLRX3O76003 335 aaKnown RBP4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 ETV4P43268 484 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 IRF9Q00978 393 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 PABPC4Q13310 644 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 TMEM200BQ69YZ2 307 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 LRSAM1Q6UWE0 723 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 RTN4RL1Q86UN2 441 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 SCYL1Q96KG9 808 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 WWC2-AS2Q96NR7 200 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 OR10A5Q9H207 317 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 MYRFQ9Y2G1 1151 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 PTPN22Q9Y2R2 807 aa4.88□□□□□ -1.63
HMGB3P12-201ENST00000438745 PRAMEF22A3QJZ6 481 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 ASMTLO95671 621 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZNF20P17024 532 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 POU3F2P20265 443 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 FNTBP49356 437 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 CD83Q01151 205 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 NFYCQ13952 458 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZNF460Q14592 562 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 ICAM4Q14773 271 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 TMEM132BQ14DG7 1078 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZXDCQ2QGD7 858 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 WDR72Q3MJ13 1102 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 GPR155Q7Z3F1 870 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 CHST14Q8NCH0 376 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 LOXL4Q96JB6 756 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 B4GALT6Q9UBX8 382 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 NCAPD3P42695 1498 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 MRC2Q9UBG0 1479 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 ERCC6L2Q5T890 1561 aa4.87□□□□□ -1.63
HMGB3P12-201ENST00000438745 A0A0G2JNJ9 132 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 CBX4O00257 560 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 OPA1O60313 960 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 HIP1RO75146 1068 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 ALDH6A1Q02252 535 aaKnown RBP4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 MOGSQ13724 837 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 TCEA2Q15560 299 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZMAT1Q5H9K5 638 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 CDCA2Q69YH5 1023 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 LARP4Q71RC2 724 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 CIR1Q86X95 450 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 KIF18BQ86Y91 864 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 BCL6BQ8N143 479 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 Q8TCH9 128 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 C8orf49Q96NF6 230 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 ACSS2Q9NR19 701 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 MAGEC2Q9UBF1 373 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 Q9UFV3 132 aa4.86□□□□□ -1.63
HMGB3P12-201ENST00000438745 LOC105371045A0A1W2PR82 267 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 PTPDC1A2A3K4 754 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 CYP17A1P05093 508 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 CDSNQ15517 529 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 TBR1Q16650 682 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 RNF151Q2KHN1 245 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 CREB3L3Q68CJ9 461 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 GIMAP6Q6P9H5 292 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 C16orf86Q6ZW13 317 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 UBE2R2Q712K3 238 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 HOMER1Q86YM7 354 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 IFNL2Q8IZJ0 200 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 CALML6Q8TD86 181 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 DVL3Q92997 716 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 NEIL1Q96FI4 390 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 BORCS6Q96GS4 357 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 FOXB1Q99853 325 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 MTFR1LQ9H019 292 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 JADE2Q9NQC1 790 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 ST6GALNAC2Q9UJ37 374 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 LAMC3Q9Y6N6 1575 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 KIF21AQ7Z4S6 1674 aa4.85□□□□□ -1.63
HMGB3P12-201ENST00000438745 PMS2P1A4D2B8 440 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 MATN2O00339 956 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZNF623O75123 536 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 JMJD7P0C870 316 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 FLT3P36888 993 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms