RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 LRRC15Q8TF66 581 aa16.52■□□□□ 0.24
CPNE1-215ENST00000437100 CYP26B1Q9NR63 512 aa16.52■□□□□ 0.24
CPNE1-215ENST00000437100 ANKEF1Q9NU02 776 aa16.52■□□□□ 0.24
CPNE1-215ENST00000437100 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-215ENST00000437100 TUBE1Q9UJT0 475 aa16.52■□□□□ 0.24
CPNE1-215ENST00000437100 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
CPNE1-215ENST00000437100 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
CPNE1-215ENST00000437100 PPME1Q9Y570 386 aa16.52■□□□□ 0.24
CPNE1-215ENST00000437100 DNAH12Q6ZR08 3092 aa16.52■□□□□ 0.23
CPNE1-215ENST00000437100 IGKV6-21A0A0C4DH24 114 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 TRIM43BA6NCK2 446 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 KCNK18Q7Z418 384 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 SH3RF1Q7Z6J0 888 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 CABP7Q86V35 215 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
CPNE1-215ENST00000437100 TRIM43Q96BQ3 446 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-215ENST00000437100 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 NACC1Q96RE7 527 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 NOC4LQ9BVI4 516 aaKnown RBP16.51■□□□□ 0.23
CPNE1-215ENST00000437100 SCAND2PQ9GZW5 306 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-215ENST00000437100 KIAA1024Q9UPX6 916 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 PCDHA2Q9Y5H9 948 aa16.51■□□□□ 0.23
CPNE1-215ENST00000437100 MYH9P35579 1960 aaKnown RBP16.5■□□□□ 0.23
CPNE1-215ENST00000437100 MAGEB2O15479 319 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 EVI5O60447 810 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 CYP2C9P11712 490 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
CPNE1-215ENST00000437100 KLRC1P26715 233 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 UBA7P41226 1012 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 NPEPPSP55786 919 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 IGBP1P78318 339 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 TRAF7Q6Q0C0 670 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 OTUD6AQ7L8S5 288 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
CPNE1-215ENST00000437100 C7orf61Q8IZ16 206 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 PIGOQ8TEQ8 1089 aa16.5■□□□□ 0.23
CPNE1-215ENST00000437100 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
CPNE1-215ENST00000437100 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
CPNE1-215ENST00000437100 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 PITPNM1O00562 1244 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 CAND2O75155 1236 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 ITGB8P26012 769 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 KARSQ15046 597 aaKnown RBP16.49■□□□□ 0.23
CPNE1-215ENST00000437100 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 CAGE1Q8TC20 777 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 CEP170P1Q96L14 293 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 SH2D3AQ9BRG2 576 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 NT5C3AQ9H0P0 336 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 NOD1Q9Y239 953 aa16.49■□□□□ 0.23
CPNE1-215ENST00000437100 A0A087WWV3 80 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 MAFO75444 373 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-215ENST00000437100 EYA4O95677 639 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 PLCG1P19174 1290 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 RFC5P40937 340 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 ME1P48163 572 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-215ENST00000437100 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 DPF3Q92784 378 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 HIPK3Q9H422 1215 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 BLOC1S4Q9NUP1 217 aa16.48■□□□□ 0.23
CPNE1-215ENST00000437100 UMODL1Q5DID0 1318 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 A0A087X0B3 334 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 FAM237AA0A1B0GTK4 181 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 E9PMD0 336 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 RPLP2P05387 115 aaKnown RBP16.47■□□□□ 0.23
CPNE1-215ENST00000437100 MGAT3Q09327 533 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 NAALADL2Q58DX5 795 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 ADALQ6DHV7 355 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 KIAA0319LQ8IZA0 1049 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 WNT8AQ9H1J5 351 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
CPNE1-215ENST00000437100 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 DGAT1O75907 488 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 TIMP1P01033 207 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 CKBP12277 381 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 CMA1P23946 247 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 TXLNAP40222 546 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 CLCN3P51790 818 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 SLC12A3P55017 1021 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 MLLT1Q03111 559 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-215ENST00000437100 DRP2Q13474 957 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 BFSP2Q13515 415 aa16.46■□□□□ 0.23
CPNE1-215ENST00000437100 EMC2Q15006 297 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms