RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DNAAF5Q86Y56 855 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 IFT20Q8IY31 132 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 IKZF4Q9H2S9 585 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 GOLGA6AQ9NYA3 693 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 GTPBP10A4D1E9 387 aaKnown RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 CES2O00748 559 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 TBCAO75347 108 aaKnown RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 PSMD10O75832 226 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 ZBTB48P10074 688 aaPredicted RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 EPB41P11171 864 aaKnown RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 CTTNQ14247 550 aaKnown RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 GBP6Q6ZN66 633 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 FAM76AQ8TAV0 307 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 EPB41L5Q9HCM4 733 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 SMCHD1A6NHR9 2005 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 ZMYM2Q9UBW7 1377 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 ZBTB39O15060 712 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
HOXD3-202ENST00000410016 ECE1P42892 770 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 FIZ1Q96SL8 496 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 KRT12Q99456 494 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 PCDHB13Q9Y5F0 798 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 FAM153BP0C7A2 387 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 GAP43P17677 238 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 RNASE9P60153 205 aaKnown RBP17.37■□□□□ 0.37
HOXD3-202ENST00000410016 GUCY2DQ02846 1103 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 FAM153CQ494X1 144 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 TCERG1LQ5VWI1 586 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 SRLQ86TD4 932 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 IQCKQ8N0W5 287 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 CSRNP1Q96S65 589 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 GOLPH3Q9H4A6 298 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 TUFT1Q9NNX1 390 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 FAM153AQ9UHL3 310 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 NFU1Q9UMS0 254 aa17.37■□□□□ 0.37
HOXD3-202ENST00000410016 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
HOXD3-202ENST00000410016 EIF3DO15371 548 aaKnown RBP eCLIP17.36■□□□□ 0.37
HOXD3-202ENST00000410016 ANXA13P27216 316 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 NMT1P30419 496 aaKnown RBP17.36■□□□□ 0.37
HOXD3-202ENST00000410016 STAT2P52630 851 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 PPP2R5CQ13362 524 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 RPS6KA1Q15418 735 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 NFIL3Q16649 462 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 GJB7Q6PEY0 223 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 OLIG1Q8TAK6 271 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 GCNT4Q9P109 453 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 KIF4AO95239 1232 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 TRADDQ15628 312 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 ZC2HC1CQ53FD0 456 aaPredicted RBP17.36■□□□□ 0.37
HOXD3-202ENST00000410016 TEX2Q8IWB9 1127 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 TPH2Q8IWU9 490 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 SLC5A5Q92911 643 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 DYDC2Q96IM9 177 aa17.36■□□□□ 0.37
HOXD3-202ENST00000410016 ATP8B3O60423 1300 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 DDX3XO00571 662 aaKnown RBP eCLIP17.35■□□□□ 0.37
HOXD3-202ENST00000410016 KCNK3O14649 394 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 OPA1O60313 960 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 FLOT1O75955 427 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 PPFIA1Q13136 1202 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 AOC3Q16853 763 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 LRCH2Q5VUJ6 765 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 SLFN11Q7Z7L1 901 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 TPCN2Q8NHX9 752 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 ACER1Q8TDN7 264 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 SCFD2Q8WU76 684 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 CASKIN2Q8WXE0 1202 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 ARL8AQ96BM9 186 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 ZIM3Q96PE6 472 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 MYO1CO00159 1063 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 CFBP00751 764 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 HSPA1LP34931 641 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 TTMPQ5BVD1 217 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 MSL1Q68DK7 614 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 CC2D2BQ6DHV5 1058 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 STYK1Q6J9G0 422 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 MYCT1Q8N699 235 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
HOXD3-202ENST00000410016 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
HOXD3-202ENST00000410016 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
HOXD3-202ENST00000410016 RRP15Q9Y3B9 282 aaKnown RBP17.35■□□□□ 0.37
HOXD3-202ENST00000410016 PLSCR1O15162 318 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 RAD51CO43502 376 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 PPFIA4O75335 1185 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 CLSTN1O94985 981 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 FAM13AO94988 1023 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 PSMC2P35998 433 aaKnown RBP17.34■□□□□ 0.37
HOXD3-202ENST00000410016 IRAK1P51617 712 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 ZNF131P52739 623 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 ZNF720Q7Z2F6 126 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 MREGQ8N565 214 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 ACTRT1Q8TDG2 376 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 IFT81Q8WYA0 676 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 PARVGQ9HBI0 331 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 FEZ2Q9UHY8 353 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 280.2 ms