RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ARHGAP28Q9P2N2 729 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
LSM5-206ENST00000409987 PCDHGA8Q9Y5G5 932 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 PCDHGA7Q9Y5G6 932 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 PCDHGA6Q9Y5G7 932 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 PPP2R3BQ9Y5P8 575 aa6.77□□□□□ -1.33
LSM5-206ENST00000409987 ZNF839A8K0R7 811 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 NFIBO00712 420 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 ITGB5P18084 799 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 ENPP1P22413 925 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 PTGS1P23219 599 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 MC3RP41968 323 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 KRT85P78386 507 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 ALDH6A1Q02252 535 aaKnown RBP6.76□□□□□ -1.33
LSM5-206ENST00000409987 ODF1Q14990 250 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 FSCN1Q16658 493 aaKnown RBP6.76□□□□□ -1.33
LSM5-206ENST00000409987 CT83Q5H943 113 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 TTC38Q5R3I4 469 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 GORABQ5T7V8 394 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 OLFML2BQ68BL8 750 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 ZNF605Q86T29 641 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 CHPFQ8IZ52 775 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 CPA5Q8WXQ8 436 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 FAM168AQ92567 244 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 LIN37Q96GY3 246 aaPredicted RBP6.76□□□□□ -1.33
LSM5-206ENST00000409987 MAML3Q96JK9 1138 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 CAMKK2Q96RR4 588 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 TUBGCP5Q96RT8 1024 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 FOXB1Q99853 325 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 AMNQ9BXJ7 453 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
LSM5-206ENST00000409987 LUC7L2Q9Y383 392 aaKnown RBP6.76□□□□□ -1.33
LSM5-206ENST00000409987 PRSS38A1L453 326 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 PRPF6O94906 941 aaKnown RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 ENO2P09104 434 aaPredicted RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 ZSCAN20P17040 1043 aaPredicted RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 CCND1P24385 295 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 NKX3-2P78367 333 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 PFKPQ01813 784 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 SLC6A3Q01959 620 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 LRSAM1Q6UWE0 723 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 TMC5Q6UXY8 1006 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 CD300LDQ6UXZ3 194 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 PNMA8AQ86V59 439 aaPredicted RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 WDR75Q8IWA0 830 aaKnown RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 E2F7Q96AV8 911 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 EAF2Q96CJ1 260 aaPredicted RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 LUC7LQ9NQ29 371 aaKnown RBP6.75□□□□□ -1.33
LSM5-206ENST00000409987 IP6K2Q9UHH9 426 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 CARMIL2Q6F5E8 1435 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 IRS2Q9Y4H2 1338 aa6.75□□□□□ -1.33
LSM5-206ENST00000409987 MYOCOSA0A1B0GUC4 107 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 SNUPNO95149 360 aaKnown RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 APOL3O95236 402 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 NCAM1P13591 858 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 RGS3P49796 1198 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 NCKAP1LP55160 1127 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 SRSF3P84103 164 aaKnown RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 PITRM1Q5JRX3 1037 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 TMEM240Q5SV17 173 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 PRAMEF9Q5VWM5 478 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 VASNQ6EMK4 673 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 SLFN12LQ6IEE8 588 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 TIGD7Q6NT04 549 aaPredicted RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 MPZL3Q6UWV2 235 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 KANSL1Q7Z3B3 1105 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 ZC3H18Q86VM9 953 aaKnown RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 AMOTL1Q8IY63 956 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 FAM9AQ8IZU1 332 aaPredicted RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 JPH3Q8WXH2 748 aaPredicted RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 DDX11Q96FC9 970 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 RNF38Q9H0F5 515 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 QRSL1Q9H0R6 528 aaKnown RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 PRDM12Q9H4Q4 367 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 TCF7L1Q9HCS4 588 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 NGRNQ9NPE2 291 aaKnown RBP6.74□□□□□ -1.33
LSM5-206ENST00000409987 INCENPQ9NQS7 918 aa6.74□□□□□ -1.33
LSM5-206ENST00000409987 CCDC194A0A1B0GVG4 234 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 XPOTO43592 962 aaKnown RBP6.73□□□□□ -1.33
LSM5-206ENST00000409987 RFPL1O75677 317 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 ATF2P15336 505 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 RECQLP46063 649 aaPredicted RBP6.73□□□□□ -1.33
LSM5-206ENST00000409987 CDR1P51861 262 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 ROM1Q03395 351 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 CLUL1Q15846 466 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.73□□□□□ -1.33
LSM5-206ENST00000409987 TOR2AQ5JU69 321 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 CCDC62Q6P9F0 684 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 UNQ6494/PRO21346Q6UXR6 183 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 TTLL7Q6ZT98 887 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 LDHDQ86WU2 507 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 EXOC8Q8IYI6 725 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 CPA6Q8N4T0 437 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 DTX3Q8N9I9 347 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms