RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 DDX1Q92499 740 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 CLMNQ96JQ2 1002 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 PDLIM2Q96JY6 352 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 EXOC2Q96KP1 924 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 CAPNS2Q96L46 248 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 ZIC5Q96T25 663 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 ESYT1Q9BSJ8 1104 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 MRIQ9BWK5 157 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 CSRNP2Q9H175 543 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 ALDH8A1Q9H2A2 487 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 CHRDQ9H2X0 955 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 ELP3Q9H9T3 547 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 NLRC4Q9NPP4 1024 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 INTS7Q9NVH2 962 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 CGNQ9P2M7 1197 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 SAP30BPQ9UHR5 308 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 ANGEL1Q9UNK9 670 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 FNDC3AQ9Y2H6 1198 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 SLC45A1Q9Y2W3 748 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 TTC41PQ6P2S7 1318 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 OTOFQ9HC10 1997 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 ATRNL1Q5VV63 1379 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 RPAP1Q9BWH6 1393 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 A0A1W2PQH9 124 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 TCRBV5S4A2TA0A5A2 114 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FAM181BA6NEQ2 426 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 hCG_1984214I3L0E3 225 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 PMM2O15305 246 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 PRKAB2O43741 272 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FBXO21O94952 628 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 MBD4O95243 580 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 AGR2O95994 175 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 CCDC172P0C7W6 258 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 ADD2P35612 726 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 DDIT3P35638 169 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 GMPRP36959 345 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 NOP2P46087 812 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 ZNF157P51786 506 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 PDE1AP54750 535 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 HMGN5P82970 282 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 CLCQ05315 142 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 MPP2Q14168 576 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 BECN1Q14457 450 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 KRT72Q14CN4 511 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 PTPN21Q16825 1174 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 SLC10A6Q3KNW5 377 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 KIAA0319Q5VV43 1072 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 TTBK2Q6IQ55 1244 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 XRRA1Q6P2D8 792 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 MZT2AQ6P582 158 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 PKN3Q6P5Z2 889 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 AGMOQ6ZNB7 445 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 RUFY4Q6ZNE9 571 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FAM83AQ86UY5 434 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 RASAL3Q86YV0 1011 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 TRIM42Q8IWZ5 723 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 OTUD6BQ8N6M0 293 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 C19orf47Q8N9M1 422 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 KDF1Q8NAX2 398 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 TGFBRAP1Q8WUH2 860 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FAM151AQ8WW52 585 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 KISS1RQ969F8 398 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 CLIP3Q96DZ5 547 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 TNIP3Q96KP6 325 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 SEC62Q99442 399 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 RIOK1Q9BRS2 568 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 NOL10Q9BSC4 688 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FSD1Q9BTV5 496 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 IDI2Q9BXS1 227 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 OSBPL5Q9H0X9 879 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 ARMT1Q9H993 441 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 SAGE1Q9NXZ1 904 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 DONSONQ9NYP3 566 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 DMTF1Q9Y222 760 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 USP20Q9Y2K6 914 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FLT1P17948 1338 aa5.18□□□□□ -1.58
SF3B1-202ENST00000409915 FRMPD2Q68DX3 1309 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 WDR33Q9C0J8 1336 aaKnown RBP5.18□□□□□ -1.58
SF3B1-202ENST00000409915 THSD7BQ9C0I4 1608 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 CYP2D7A0A087X1C5 515 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 FAM155AB1AL88 458 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 F5H423 210 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SMIM22K7EJ46 135 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 M0R2C6 588 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ERC2O15083 957 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SNX2O60749 519 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 LILRA1O75019 489 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ENTPD3O75355 529 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 USP2O75604 605 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 GLRX3O76003 335 aaKnown RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 BAG3O95817 575 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SLFN14P0C7P3 912 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 CYP2D6P10635 497 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 PF4V1P10720 104 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 INPP5BP32019 993 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ADD1P35611 737 aaKnown RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 IREB2P48200 963 aaKnown RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 GJA9P57773 515 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms