RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 GIT2Q14161 759 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 SH2D3AQ9BRG2 576 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 ABCB11O95342 1321 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 KDM4FA0A1W2PPD8 638 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
SYNC-202ENST00000409190 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 ELMO3Q96BJ8 720 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 CCDC114Q96M63 670 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 ISCUQ9H1K1 167 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 KDM3AQ9Y4C1 1321 aa18.35■□□□□ 0.53
SYNC-202ENST00000409190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 DDX3XO00571 662 aaKnown RBP eCLIP18.34■□□□□ 0.53
SYNC-202ENST00000409190 HOXD13P35453 343 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 MYCT1Q8N699 235 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 CYFIP2Q96F07 1278 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 TMBIM4Q9HC24 238 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 BUB1BO60566 1050 aaPredicted RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 GUCY2CP25092 1073 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 ECHS1P30084 290 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 PLTPP55058 493 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 ZNF746Q6NUN9 644 aaPredicted RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 PAXIP1Q6ZW49 1069 aaPredicted RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 CEP57Q86XR8 500 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 CABS1Q96KC9 395 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 LOC102724159A0A0B4J2E5 919 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 SLC12A3P55017 1021 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 PWP2Q15269 919 aaKnown RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 MCTP2Q6DN12 878 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 CPLX4Q7Z7G2 160 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 VPS36Q86VN1 386 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 PALB2Q86YC2 1186 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.53
SYNC-202ENST00000409190 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 PPP1R9AQ9ULJ8 1098 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
SYNC-202ENST00000409190 SNX24Q9Y343 169 aa18.34■□□□□ 0.53
SYNC-202ENST00000409190 HMGB1P1B2RPK0 211 aaPredicted RBP18.33■□□□□ 0.53
SYNC-202ENST00000409190 FAM86B1E9PN63 330 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 EVI5O60447 810 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 FAM86B2P0C5J1 330 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 SHMT1P34896 483 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 CERS5Q8N5B7 392 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 TAS2R14Q9NYV8 317 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 IGSF9BQ9UPX0 1349 aa18.33■□□□□ 0.53
SYNC-202ENST00000409190 SPDYE3A6NKU9 549 aa18.33■□□□□ 0.52
SYNC-202ENST00000409190 SYN2Q92777 582 aaPredicted RBP18.33■□□□□ 0.52
SYNC-202ENST00000409190 TNFRSF8P28908 595 aa18.33■□□□□ 0.52
SYNC-202ENST00000409190 HSPA9P38646 679 aaKnown RBP18.33■□□□□ 0.52
SYNC-202ENST00000409190 SLFN13Q68D06 897 aa18.33■□□□□ 0.52
SYNC-202ENST00000409190 CCDC25Q86WR0 208 aa18.33■□□□□ 0.52
SYNC-202ENST00000409190 GGT7Q9UJ14 662 aa18.33■□□□□ 0.52
SYNC-202ENST00000409190 LAMB1P07942 1786 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 DDX39AO00148 427 aaKnown RBP18.32■□□□□ 0.52
SYNC-202ENST00000409190 IFNAR2P48551 515 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 SEPT2Q15019 361 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 UBAP2Q5T6F2 1119 aaKnown RBP18.32■□□□□ 0.52
SYNC-202ENST00000409190 SLF2Q8IX21 1173 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 LRRC45Q96CN5 670 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 SCLT1Q96NL6 688 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 PNMA2Q9UL42 364 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 CCDC88AQ3V6T2 1871 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 MICALCLQ6ZW33 695 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 SLC35G2Q8TBE7 412 aa18.32■□□□□ 0.52
SYNC-202ENST00000409190 UTP11Q9Y3A2 253 aaKnown RBP18.32■□□□□ 0.52
SYNC-202ENST00000409190 EML1O00423 815 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 SHBGP04278 402 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
SYNC-202ENST00000409190 LRRC57Q8N9N7 239 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 SLC35C1Q96A29 364 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 ARHGEF26Q96DR7 871 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 AMFRQ9UKV5 643 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 FAM13AO94988 1023 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 SERPINB2P05120 415 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 STAT1P42224 750 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 DRAP1Q14919 205 aaPredicted RBP18.31■□□□□ 0.52
SYNC-202ENST00000409190 CCDC13Q8IYE1 715 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 SCFD2Q8WU76 684 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 PCIF1Q9H4Z3 704 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 ERVK-5Q9HDB9 667 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 GMNCA6NCL1 334 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 FAM107AO95990 144 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 CPP00450 1065 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 CLK2P49760 499 aaKnown RBP18.31■□□□□ 0.52
SYNC-202ENST00000409190 CCDC38Q502W7 563 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 TAX1BP1Q86VP1 789 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 LNX1Q8TBB1 728 aaPredicted RBP18.31■□□□□ 0.52
SYNC-202ENST00000409190 ACP6Q9NPH0 428 aa18.31■□□□□ 0.52
SYNC-202ENST00000409190 DDX20Q9UHI6 824 aaKnown RBP18.31■□□□□ 0.52
SYNC-202ENST00000409190 CALUO43852 315 aaPredicted RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 CFBP00751 764 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 SPATA31C1P0DKV0 1188 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 EPHA7Q15375 998 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms