RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 SV2BQ7L1I2 683 aa9.96□□□□□ -0.82
BRCC3-206ENST00000399042 CNNM3Q8NE01 707 aa9.96□□□□□ -0.82
BRCC3-206ENST00000399042 LRRC27Q9C0I9 530 aa9.96□□□□□ -0.82
BRCC3-206ENST00000399042 E9PMD0 336 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 DNM1LO00429 736 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 HBP1O60381 514 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 LGR5O75473 907 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 ZNF202O95125 648 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 PLA2G4BP0C869 781 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 GNAT1P11488 350 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 POLGP54098 1239 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-206ENST00000399042 PSMC6P62333 389 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 PURAQ00577 322 aaKnown RBP9.95□□□□□ -0.82
BRCC3-206ENST00000399042 TBC1D8BQ0IIM8 1120 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 GRB10Q13322 594 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 PLCB4Q15147 1175 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 UGCGQ16739 394 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 B3GNT9Q6UX72 402 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 C4orf19Q8IY42 314 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 EXOC8Q8IYI6 725 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 METTL13Q8N6R0 699 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 KLHDC9Q8NEP7 349 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 AFAP1L1Q8TED9 768 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 SLC7A3Q8WY07 619 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 TSEN34Q9BSV6 310 aaKnown RBP9.95□□□□□ -0.82
BRCC3-206ENST00000399042 MMTAG2Q9BU76 263 aaKnown RBP9.95□□□□□ -0.82
BRCC3-206ENST00000399042 SENP6Q9GZR1 1112 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-206ENST00000399042 BHMT2Q9H2M3 363 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 CUEDC2Q9H467 287 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 ZHX3Q9H4I2 956 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 STARD7Q9NQZ5 370 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 LMBRD1Q9NUN5 540 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 STK17AQ9UEE5 414 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 USP25Q9UHP3 1055 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 MAFBQ9Y5Q3 323 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-206ENST00000399042 EMSYQ7Z589 1322 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 LCTP09848 1927 aa9.95□□□□□ -0.82
BRCC3-206ENST00000399042 MCM3APO60318 1980 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 IGKV6D-21A0A0A0MT36 114 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 C17orf102A2RUQ5 167 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 RRN3P2A6NIE6 340 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 CCDC85CA6NKD9 419 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 EYA4O95677 639 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SMIM10L2AP0DMW4 78 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SMIM10L2BP0DMW5 78 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 CST5P28325 142 aaPredicted RBP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 AFMP43652 599 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 DNM2P50570 870 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 MCM6Q14566 821 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 ECM1Q16610 540 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 NBPF20Q3BBV1 942 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 ZNF484Q5JVG2 852 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 PLA2G4FQ68DD2 849 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 MAEAQ7L5Y9 396 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 KCTD17Q8N5Z5 321 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 RETREG2Q8NC44 543 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 LARP4BQ92615 738 aaKnown RBP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 RAD54LQ92698 747 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 CCDC47Q96A33 483 aaKnown RBP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SYAP1Q96A49 352 aaPredicted RBP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 PNMA5Q96PV4 448 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 PCYT2Q99447 389 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 JPH2Q9BR39 696 aaPredicted RBP9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SH2D3AQ9BRG2 576 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 C16orf70Q9BSU1 422 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 RNPEPQ9H4A4 650 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 GOLPH3LQ9H4A5 285 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 CYP26B1Q9NR63 512 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 ANKEF1Q9NU02 776 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 DACT1Q9NYF0 836 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 SERTAD1Q9UHV2 236 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 OGDHLQ9ULD0 1010 aa9.94□□□□□ -0.82
BRCC3-206ENST00000399042 IGSF9BQ9UPX0 1349 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 A0A0U1RQG5 324 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-206ENST00000399042 A0A1W2PQ45 241 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-206ENST00000399042 A0A1W2PQY0 241 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 TMEM150BA6NC51 233 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 ZBTB39O15060 712 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 ZNF862O60290 1169 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 USO1O60763 962 aaKnown RBP9.93□□□□□ -0.82
BRCC3-206ENST00000399042 TBCAO75347 108 aaKnown RBP9.93□□□□□ -0.82
BRCC3-206ENST00000399042 NR1I2O75469 434 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 LYPLA2O95372 231 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 F2P00734 622 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 SLFN14P0C7P3 912 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 HOXD8P13378 290 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-206ENST00000399042 INSRRP14616 1297 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 CAPN2P17655 700 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 LIG1P18858 919 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 TMOD1P28289 359 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 GJA8P48165 433 aa9.93□□□□□ -0.82
BRCC3-206ENST00000399042 NPEPPSP55786 919 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms