RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 MYH9P35579 1960 aaKnown RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 IGSF9BQ9UPX0 1349 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 C17orf102A2RUQ5 167 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 NRG2O14511 850 aaPredicted RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 KIAA0355O15063 1070 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 NEMFO60524 1076 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 LGR5O75473 907 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 PSMD10O75832 226 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 RAG1P15918 1043 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 CYP2C18P33260 490 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 MCM7P33993 719 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 IGBP1P78318 339 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 KRT76Q01546 638 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 PPFIA1Q13136 1202 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 PTGISQ16647 500 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 UGCGQ16739 394 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 PPP4R3AQ6IN85 833 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 ABHD15Q6UXT9 468 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 TRMT1LQ7Z2T5 733 aaKnown RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 SESTD1Q86VW0 696 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 LMBR1Q8WVP7 490 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 TRAPPC12Q8WVT3 735 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 DHX38Q92620 1227 aaKnown RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 HAS1Q92839 578 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 WNT8BQ93098 351 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 SNX21Q969T3 373 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 ZBTB10Q96DT7 871 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
BRCC3-205ENST00000399026 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 HIPK3Q9H422 1215 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 RNPEPQ9H4A4 650 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 AZI2Q9H6S1 392 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 ZNF302Q9NR11 478 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 VAV3Q9UKW4 847 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 SAMM50Q9Y512 469 aa9.43□□□□□ -0.9
BRCC3-205ENST00000399026 RANBP2P49792 3224 aaKnown RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 MARCH6O60337 910 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 PSAPP07602 524 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 STAT5BP51692 787 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 CCL23P55773 120 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 PLCB4Q15147 1175 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 ZNF174Q15697 407 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 GRIK4Q16099 956 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 CALCRLQ16602 461 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 FAM160B1Q5W0V3 765 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 NCAPH2Q6IBW4 605 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 SWSAP1Q6NVH7 229 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 MIER3Q7Z3K6 550 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 FERMT3Q86UX7 667 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 SMAP1Q8IYB5 467 aaPredicted RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 BANK1Q8NDB2 785 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 ATP6V0A1Q93050 837 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 SCLYQ96I15 445 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 RIT2Q99578 217 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 NAP1L4Q99733 375 aaKnown RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 LBHD1Q9BQE6 289 aaPredicted RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 SEZ6LQ9BYH1 1024 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 SMARCAD1Q9H4L7 1026 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 DISC1Q9NRI5 854 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 SETD4Q9NVD3 440 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 ERAP1Q9NZ08 941 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 GABBR1Q9UBS5 961 aa9.42□□□□□ -0.9
BRCC3-205ENST00000399026 NOL7Q9UMY1 257 aaKnown RBP9.42□□□□□ -0.9
BRCC3-205ENST00000399026 KAT6AQ92794 2004 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 IGKV6D-21A0A0A0MT36 114 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 EML1O00423 815 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 TREHO43280 583 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 ATG7O95352 703 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 TIMP1P01033 207 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 CTSHP09668 335 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 CD46P15529 392 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 U2AF2P26368 475 aaKnown RBP eCLIP9.41□□□□□ -0.91e-9■■■□□ 15.6
BRCC3-205ENST00000399026 HOXC8P31273 242 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 JAK3P52333 1124 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 EPHB4P54760 987 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 PRKCEQ02156 737 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 PLA2G2CQ5R387 149 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 RUFY4Q6ZNE9 571 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 CKAP2LQ8IYA6 745 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 AFAP1L1Q8TED9 768 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 GDF15Q99988 308 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 UBE2OQ9C0C9 1292 aaKnown RBP9.41□□□□□ -0.9
BRCC3-205ENST00000399026 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 PCDHB6Q9Y5E3 794 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 PCDHA10Q9Y5I2 948 aa9.41□□□□□ -0.9
BRCC3-205ENST00000399026 TMEM150BA6NC51 233 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 TBX3O15119 743 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 ZNF862O60290 1169 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms