RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 AIPL1Q9NZN9 384 aa14.99□□□□□ -0.01
COL6A2-203ENST00000397763 PNMA2Q9UL42 364 aa14.99□□□□□ -0.01
COL6A2-203ENST00000397763 NFS1Q9Y697 457 aa14.99□□□□□ -0.01
COL6A2-203ENST00000397763 DDX3XO00571 662 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL6A2-203ENST00000397763 FAM107AO95990 144 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
COL6A2-203ENST00000397763 PALB2Q86YC2 1186 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 LRRC57Q8N9N7 239 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 ROBO3Q96MS0 1386 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 OSBPL7Q9BZF2 842 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 BHMT2Q9H2M3 363 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 VCPKMTQ9H867 229 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 PPP1R9AQ9ULJ8 1098 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 GPR75-ASB3A0A0A6YYF3 556 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 PNMA6FA0A0J9YX94 578 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 GMNCA6NCL1 334 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 PPP1R12BO60237 982 aaPredicted RBP14.98□□□□□ -0.01
COL6A2-203ENST00000397763 ELF1P32519 619 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 GALCP54803 685 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 ZNF543Q08ER8 600 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 IKQ13123 557 aaPredicted RBP14.98□□□□□ -0.01
COL6A2-203ENST00000397763 SCFD2Q8WU76 684 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 SELENOSQ9BQE4 189 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
COL6A2-203ENST00000397763 TAS2R14Q9NYV8 317 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 RNF14Q9UBS8 474 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 PCDHAC2Q9Y5I4 1007 aa14.98□□□□□ -0.01
COL6A2-203ENST00000397763 BUB1BO60566 1050 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 AFPP02771 609 aaKnown RBP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 UBXN2AP68543 259 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 SEMA3FQ13275 785 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 CPLX4Q7Z7G2 160 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 ZFPM1Q8IX07 1006 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 ELMO3Q96BJ8 720 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 ERVK-5Q9HDB9 667 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 PLCB1Q9NQ66 1216 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 DONSONQ9NYP3 566 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 TMEM59LQ9UK28 342 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 SNX24Q9Y343 169 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 DAGLAQ9Y4D2 1042 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 CAND2O75155 1236 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 H2AFZP0C0S5 128 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 IFNAR2P48551 515 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 MRPL12P52815 198 aaKnown RBP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 PLTPP55058 493 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 H2AFVQ71UI9 128 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 MAEAQ7L5Y9 396 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 CEP63Q96MT8 703 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 EDEM3Q9BZQ6 932 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 ABCB11O95342 1321 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 ESYT2A0FGR8 921 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 SPDYE3A6NKU9 549 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 FOXO6A8MYZ6 492 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 NMT1P30419 496 aaKnown RBP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 GRAPQ13588 217 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 CCDC38Q502W7 563 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 MREGQ8N565 214 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 GRAPLQ8TC17 118 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 RUSC1Q9BVN2 902 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 NUCKS1Q9H1E3 243 aaKnown RBP14.97□□□□□ -0.01
COL6A2-203ENST00000397763 POLLQ9UGP5 575 aa14.97□□□□□ -0.01
COL6A2-203ENST00000397763 KRT13P13646 458 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 GIT2Q14161 759 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 PPP2R5AQ15172 486 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 SNCBQ16143 134 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 QRICH1Q2TAL8 776 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.01
COL6A2-203ENST00000397763 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
COL6A2-203ENST00000397763 MTFR1LQ9H019 292 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 SLC12A6Q9UHW9 1150 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 CCDC88AQ3V6T2 1871 aa14.96□□□□□ -0.01
COL6A2-203ENST00000397763 CYP2J2P51589 502 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 CTTNQ14247 550 aaKnown RBP14.96□□□□□ -0.02
COL6A2-203ENST00000397763 ZNF746Q6NUN9 644 aaPredicted RBP14.96□□□□□ -0.02
COL6A2-203ENST00000397763 CPNE8Q86YQ8 564 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 CNBD1Q8NA66 436 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 RUBCNQ92622 972 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 ARHGEF26Q96DR7 871 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 SEC16BQ96JE7 1060 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 LRRC27Q9C0I9 530 aa14.96□□□□□ -0.02
COL6A2-203ENST00000397763 CCNL1Q9UK58 526 aaPredicted RBP14.96□□□□□ -0.02
COL6A2-203ENST00000397763 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
COL6A2-203ENST00000397763 NEBLO76041 1014 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 CLNS1AP54105 237 aaKnown RBP14.95□□□□□ -0.02
COL6A2-203ENST00000397763 SLC12A3P55017 1021 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 PPP2R2AP63151 447 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 NFIAQ12857 509 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 NAA25Q14CX7 972 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 DOK7Q18PE1 504 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
COL6A2-203ENST00000397763 PPP4R3AQ6IN85 833 aa14.95□□□□□ -0.02
COL6A2-203ENST00000397763 CYB5D1Q6P9G0 228 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms