RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TLDC1Q6P9B6 456 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
GABPB1-204ENST00000396464 FKBP9P1Q75LS8 142 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 NLRC3Q7RTR2 1065 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 GPR155Q7Z3F1 870 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 TBC1D1Q86TI0 1168 aaPredicted RBP5.87□□□□□ -1.47
GABPB1-204ENST00000396464 ZNF227Q86WZ6 799 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 SLFN12Q8IYM2 578 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 NXPE1Q8N323 547 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 MYCT1Q8N699 235 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 ANKS4BQ8N8V4 417 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 TRIM63Q969Q1 353 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 ATG4CQ96DT6 458 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 AHCYL2Q96HN2 611 aaKnown RBP5.87□□□□□ -1.47
GABPB1-204ENST00000396464 LGR4Q9BXB1 951 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 ASPNQ9BXN1 380 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 AP1M1Q9BXS5 423 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 MCOLN1Q9GZU1 580 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 SMOC1Q9H4F8 434 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 ZCCHC4Q9H5U6 513 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 GMIPQ9P107 970 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 PDP2Q9P2J9 529 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 GJD2Q9UKL4 321 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 ACAD8Q9UKU7 415 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 TPCN1Q9ULQ1 816 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 TMX2Q9Y320 296 aa5.87□□□□□ -1.47
GABPB1-204ENST00000396464 PRR36Q9H6K5 1346 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 TCRBV16S1A1N1A0A5B0 115 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 TRIM75PA6NK02 468 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 TNFRSF10CO14798 259 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 AP1G1O43747 822 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA12O60330 932 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PQBP1O60828 265 aaKnown RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 ZBED1O96006 694 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 CD4P01730 458 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PYGLP06737 847 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 ITGAVP06756 1048 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 IL6STP40189 918 aaPredicted RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 TSPAN7P41732 249 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 KRT85P78386 507 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 MPP1Q00013 466 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 APBA1Q02410 837 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PRKG2Q13237 762 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 G3BP1Q13283 466 aaKnown RBP eCLIP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 MLECQ14165 292 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 SEPT2Q15019 361 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 ZNF385BQ569K4 471 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 RRP12Q5JTH9 1297 aaKnown RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 TMEM201Q5SNT2 666 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PGM2L1Q6PCE3 622 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 SRGAP1Q7Z6B7 1085 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 NKAIN3Q8N8D7 197 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 DEPTORQ8TB45 409 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 BAHD1Q8TBE0 780 aaPredicted RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 CCDC74BQ96LY2 380 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 KREMEN1Q96MU8 473 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 SEZ6LQ9BYH1 1024 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 MYLK2Q9H1R3 596 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 AGO4Q9HCK5 861 aaKnown RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 LRP2BPQ9P2M1 347 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 SUSD2Q9UGT4 822 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 FBXO10Q9UK96 956 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 ZNF214Q9UL59 606 aaPredicted RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGB6Q9Y5F9 930 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA9Q9Y5G4 932 aaKnown RBP5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA8Q9Y5G5 932 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA7Q9Y5G6 932 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA6Q9Y5G7 932 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA3Q9Y5H0 932 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 PCDHGA2Q9Y5H1 932 aa5.86□□□□□ -1.47
GABPB1-204ENST00000396464 RASA4BC9J798 803 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 EYA2O00167 538 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 RASA4O43374 803 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 DNAJA2O60884 412 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 TMCC2O75069 709 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 CNOT4O95628 575 aaKnown RBP5.85□□□□□ -1.47
GABPB1-204ENST00000396464 BMP7P18075 431 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 SCP2P22307 547 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 RPL10P27635 214 aaKnown RBP5.85□□□□□ -1.47
GABPB1-204ENST00000396464 GBP1P32455 592 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 CLK1P49759 484 aaKnown RBP5.85□□□□□ -1.47
GABPB1-204ENST00000396464 DSG1Q02413 1049 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 SART3Q15020 963 aaKnown RBP5.85□□□□□ -1.47
GABPB1-204ENST00000396464 SLC14A2Q15849 920 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 TIGD5Q53EQ6 642 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 VPS53Q5VIR6 699 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 TCERG1LQ5VWI1 586 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 FAAH2Q6GMR7 532 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 ZCCHC8Q6NZY4 707 aaKnown RBP5.85□□□□□ -1.47
GABPB1-204ENST00000396464 ZBTB34Q8NCN2 500 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 FAM156AQ8NDB6 213 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 SMC1BQ8NDV3 1235 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 GOLGA1Q92805 767 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 RPGRQ92834 1020 aaKnown RBP5.85□□□□□ -1.47
GABPB1-204ENST00000396464 PPP1R14AQ96A00 147 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 ZBTB10Q96DT7 871 aa5.85□□□□□ -1.47
GABPB1-204ENST00000396464 WNK4Q96J92 1243 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms