RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 GPBP1Q86WP2 473 aa9.37□□□□□ -0.91
GAPVD1-204ENST00000394083 ANKRD13CQ8N6S4 541 aa9.37□□□□□ -0.91
GAPVD1-204ENST00000394083 ZSWIM1Q9BR11 485 aa9.37□□□□□ -0.91
GAPVD1-204ENST00000394083 MXRA8Q9BRK3 442 aa9.37□□□□□ -0.91
GAPVD1-204ENST00000394083 PDCD2LQ9BRP1 358 aa9.37□□□□□ -0.91
GAPVD1-204ENST00000394083 A0A1W2PQJ5 194 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 LRRIQ3A6PVS8 624 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 N4BP3O15049 544 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 EVI5O60447 810 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 PTK2Q05397 1052 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 PAPD7Q5XG87 772 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 CXorf38Q8TB03 319 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 KATNBL1Q9H079 304 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 PXMP2Q9NR77 195 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 KLRC1P26715 233 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 GYS2P54840 703 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 AP3B2Q13367 1082 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 GPAT2Q6NUI2 795 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 OLFML3Q9NRN5 406 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 MAP2K7O14733 419 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 CHMP2AO43633 222 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 HMGCS2P54868 508 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 BEND6Q5SZJ8 279 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 EXOC1Q9NV70 894 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 CYP39A1Q9NYL5 469 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 EPN1Q9Y6I3 576 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 O00370 1275 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 IPO5O00410 1097 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.915e-8■■□□□ 13.6
GAPVD1-204ENST00000394083 TBX3O15119 743 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 RAD21O60216 631 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 SORBS3O60504 671 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 CHRNB2P17787 502 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 IGFBP6P24592 240 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 AADACL2Q6P093 401 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 ARHGEF19Q8IW93 802 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 LXNQ9BS40 222 aa9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 TOPORSQ9NS56 1045 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-204ENST00000394083 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 C12orf42Q96LP6 360 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 KREMEN1Q96MU8 473 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 PKD2L1Q9P0L9 805 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 RAB21Q9UL25 225 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 TRIM49P0CI25 452 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 TRIM49CP0CI26 452 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 BACE1P56817 501 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 PDXDC1Q6P996 788 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 INPP4AQ96PE3 977 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 PCDHB18PQ96TA0 734 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 PARD6BQ9BYG5 372 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 GGA3Q9NZ52 723 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 STXBP5LQ9Y2K9 1186 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 IGKV6D-21A0A0A0MT36 114 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 CDK17Q00537 523 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 ZNF572Q7Z3I7 529 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 VSIG10LQ86VR7 867 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 SH2D4AQ9H788 454 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 PRDM10Q9NQV6 1147 aa9.35□□□□□ -0.91
GAPVD1-204ENST00000394083 IGHA2P01877 340 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 GJB1P08034 283 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 CXCR5P32302 372 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 EIF4A3P38919 411 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 DAB2IPQ5VWQ8 1189 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 SV2BQ7L1I2 683 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 SLC16A10Q8TF71 515 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 TMEM59LQ9UK28 342 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 PATJQ8NI35 1801 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 DDX39AO00148 427 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 IRF6O14896 467 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 BCRP11274 1271 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 EIF2AK2P19525 551 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 DALRD3Q5D0E6 543 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 PCNX4Q63HM2 1172 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 GRID2IPA4D2P6 1211 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 ZMYND10O75800 440 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 EYA4O95677 639 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 EDNRBP24530 442 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 POU5F1Q01860 360 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 IQCEQ6IPM2 695 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 NFRKBQ6P4R8 1299 aa9.34□□□□□ -0.91
GAPVD1-204ENST00000394083 C15orf39Q6ZRI6 1047 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms