RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 C1orf146Q5VVC0 180 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 NCAPG2Q86XI2 1143 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 GRAMD1AQ96CP6 724 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 FGD4Q96M96 766 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.532e-8■■□□□ 12.9
SNAPC3-202ENST00000380821 CAPN11Q9UMQ6 739 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 HP1BP3Q5SSJ5 553 aaPredicted RBP18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 TMTC4Q5T4D3 741 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 COA7Q96BR5 231 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 GDAQ9Y2T3 454 aa18.33■□□□□ 0.53
SNAPC3-202ENST00000380821 PRDM15P57071 1507 aaPredicted RBP18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 CHRNA3P32297 505 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 RCAN1P53805 252 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 PTPN12Q05209 780 aaKnown RBP18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 ORC2Q13416 577 aaPredicted RBP18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 TRMT10CQ7L0Y3 403 aaKnown RBP18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 CEP70Q8NHQ1 597 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 CHMP6Q96FZ7 201 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 GGPS1O95749 300 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 PSAPP07602 524 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 PSMA2P25787 234 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 SLFN12LQ6IEE8 588 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 SLITRK6Q9H5Y7 841 aa18.33■□□□□ 0.52
SNAPC3-202ENST00000380821 TYW5A2RUC4 315 aaKnown RBP18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 PAMP19021 973 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 UBXN2AP68543 259 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 GFPT1Q06210 699 aaPredicted RBP18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 SLC12A1Q13621 1099 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 C16orf87Q6PH81 154 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 RNF169Q8NCN4 708 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 LRRC37BQ96QE4 947 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 IGBP1P78318 339 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 FAM149B1Q96BN6 582 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 DYDC2Q96IM9 177 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 ADGRG1Q9Y653 693 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 ERICH1Q86X53 443 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 TGS1Q96RS0 853 aaKnown RBP18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 YIPF3Q9GZM5 350 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 BMP3P12645 472 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 GSPT2Q8IYD1 628 aaKnown RBP18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 RAD54LQ92698 747 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 AIFM3Q96NN9 605 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 TFAMQ00059 246 aaKnown RBP18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 AP3B2Q13367 1082 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 RGS9BPQ6ZS82 235 aa18.32■□□□□ 0.52
SNAPC3-202ENST00000380821 PVALEFA0A1B0GWK0 134 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 STAT2P52630 851 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 ZWILCHQ9H900 591 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 SLC24A3Q9HC58 644 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 DNAJC17Q9NVM6 304 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 G3BP2Q9UN86 482 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 AKT3Q9Y243 479 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 USP27XA6NNY8 438 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 KIAA0825Q8IV33 1275 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 HSPH1Q92598 858 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 H0Y3Z8 333 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 SLC16A2P36021 539 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 OCRLQ01968 901 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 DOK7Q18PE1 504 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 CCDC92Q53HC0 331 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 MYLK4Q86YV6 388 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 GCOM2Q9BZD3 368 aaPredicted RBP18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 KLC4Q9NSK0 619 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 LDHAP00338 332 aaKnown RBP18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 UBE2SQ16763 222 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 KIF19Q2TAC6 998 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 ZBTB18Q99592 522 aa18.31■□□□□ 0.52
SNAPC3-202ENST00000380821 ARHGAP10A1A4S6 786 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 YWHAHQ04917 246 aaPredicted RBP18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 ARL13BQ3SXY8 428 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 GADL1Q6ZQY3 521 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 NDE1Q9NXR1 346 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 VIPAS39Q9H9C1 493 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 HEXIM2Q96MH2 286 aaKnown RBP18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 DHX36Q9H2U1 1008 aaKnown RBP18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 LMTK3Q96Q04 1460 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 NFRKBQ6P4R8 1299 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 FAM47EQ6ZV65 393 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 SIX6OS1Q8N1H7 587 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 SNF8Q96H20 258 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 CNOT8Q9UFF9 292 aaKnown RBP18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
SNAPC3-202ENST00000380821 SASH1O94885 1247 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 MYBL1P10243 752 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 ANAPC7Q9UJX3 599 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 A0A1W2PQC6 194 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 TRIM49BA6NDI0 452 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 INO80B-WBP1J3KQ70 363 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms