RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 EXOC3L1Q86VI1 746 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 MTMR9Q96QG7 549 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 LRRC42Q9Y546 428 aa12.71□□□□□ -0.37
SMARCA1-201ENST00000371121 USP17L12C9JPN9 530 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 USP17L21D6R901 530 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 IFNAR2P48551 515 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 UNC13DQ70J99 1090 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.38
SMARCA1-201ENST00000371121 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 COPS2P61201 443 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 CACNA2D4Q7Z3S7 1137 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 ZC3H3Q8IXZ2 948 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 CCHCR1Q8TD31 782 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 FGFR1OP2Q9NVK5 253 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 SIGLEC16A6NMB1 481 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 EVI5O60447 810 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 SLC9A1P19634 815 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 PTGIRP43119 386 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 MARSP56192 900 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 MTMR3Q13615 1198 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 AUHQ13825 339 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 LRRC14Q15048 493 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 SIX2Q9NPC8 291 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 ZFATQ9P243 1243 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 DBR1Q9UK59 544 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 ZNFX1Q9P2E3 1918 aaKnown RBP12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 FAM170AA1A519 330 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 SLC37A4O43826 429 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 GJA10Q969M2 543 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 FAM136AQ96C01 138 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 FMO2Q99518 471 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.7□□□□□ -0.383e-7■■□□□ 12.2
SMARCA1-201ENST00000371121 BARHL2Q9NY43 387 aa12.7□□□□□ -0.38
SMARCA1-201ENST00000371121 PEX11AO75192 247 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 PTENP60484 403 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 ADAM9Q13443 819 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 SLITRK6Q9H5Y7 841 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 TTC7AQ9ULT0 858 aaPredicted RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 SPDYE3A6NKU9 549 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 PDE8AO60658 829 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 HOXD13P35453 343 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 DDX12PQ92771 950 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 NAF1Q96HR8 494 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 AHCYL1O43865 530 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 CCNT1O60563 726 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 CTCFP49711 727 aaPredicted RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 PMS2P54278 862 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 ADAT2Q7Z6V5 191 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 SH3RF3Q8TEJ3 882 aaPredicted RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 ALG3Q92685 438 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 AK8Q96MA6 479 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 OSBPL1AQ9BXW6 950 aa12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 SUCLA2Q9P2R7 463 aaPredicted RBP12.69□□□□□ -0.38
SMARCA1-201ENST00000371121 POTEMA6NI47 508 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 LAD1O00515 517 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 DDX3XO00571 662 aaKnown RBP eCLIP12.68□□□□□ -0.387e-23■□□□□ 10.3
SMARCA1-201ENST00000371121 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 JAM2P57087 298 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 KLHL30Q0D2K2 578 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 UHMK1Q8TAS1 419 aaKnown RBP12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 SELENOSQ9BQE4 189 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 SMIM23A6NLE4 172 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 FGGP02679 453 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 OR52E8Q6IFG1 317 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 AAASQ9NRG9 546 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 STK38LQ9Y2H1 464 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 PVALEFA0A1B0GWK0 134 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 CCDC188H7C350 402 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 FGFR4P22455 802 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms