RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ARHGEF39Q8N4T4 335 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 SLC43A3Q8NBI5 491 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 NUP43Q8NFH3 380 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 FGD4Q96M96 766 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 PTCHD1Q96NR3 888 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 FCRL3Q96P31 734 aaPredicted RBP6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 CRAMP1Q96RY5 1269 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 PLCD4Q9BRC7 762 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 UTP14AQ9BVJ6 771 aaKnown RBP6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 PNNQ9H307 717 aaKnown RBP6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 IGSF5Q9NSI5 407 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 ACSL6Q9UKU0 697 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 BACE2Q9Y5Z0 518 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 ABCC4O15439 1325 aa6.73□□□□□ -1.33
RNU4-4P-201ENST00000364588 A0A1W2PQ27 194 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 A0A1W2PQ64 194 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 A0A1W2PQD8 194 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 TCAF2A6NFQ2 919 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 STXBP3O00186 592 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 TRAF5O00463 557 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 EFEMP2O95967 443 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 PRKCAP17252 672 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 DNAJA1P31689 397 aaKnown RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 TMPOP42166 694 aaKnown RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 CTCFP49711 727 aaPredicted RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 SEPHS1P49903 392 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 LBX1P52954 281 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 JAG1P78504 1218 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 KRT24Q2M2I5 525 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 PARP10Q53GL7 1025 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 COPS6Q7L5N1 327 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 SIRT2Q8IXJ6 389 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 CCDC146Q8IYE0 955 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 TOX2Q96NM4 488 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 JMJD8Q96S16 334 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 APBA2Q99767 749 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 TMX4Q9H1E5 349 aaPredicted RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 ZNF552Q9H707 407 aaPredicted RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 DDX21Q9NR30 783 aaKnown RBP eCLIP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 IMPACTQ9P2X3 320 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 WDR33Q9C0J8 1336 aaKnown RBP6.72□□□□□ -1.33
RNU4-4P-201ENST00000364588 TRBV23OR9-2A0A075B6M9 112 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 TEX51A0A1B0GUA7 166 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 AURKAO14965 403 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 MPOP05164 745 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 GALK1P51570 392 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 CYP4F8P98187 520 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 CXCL9Q07325 125 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 FXNQ16595 210 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 SLC10A5Q5PT55 438 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 DPP8Q6V1X1 898 aaPredicted RBP6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 USP50Q70EL3 339 aaPredicted RBP6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 NLRP10Q86W26 655 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 ZNF408Q9H9D4 720 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 TNFRSF12AQ9NP84 129 aa6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 R3HCC1Q9Y3T6 440 aaKnown RBP6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 LAS1LQ9Y4W2 734 aaKnown RBP6.71□□□□□ -1.34
RNU4-4P-201ENST00000364588 NOP56O00567 594 aaKnown RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 RAD17O75943 681 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 HSPA8P11142 646 aaKnown RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 L1CAMP32004 1257 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 GMPSP49915 693 aaPredicted RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 LMOD3Q0VAK6 560 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 TCIRG1Q13488 830 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 HSP90AB3PQ58FF7 597 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 CST9Q5W186 159 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 CYP4F22Q6NT55 531 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 C6orf15Q6UXA7 325 aaPredicted RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 FAM178BQ8IXR5 827 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 TMEM52Q8NDY8 209 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 BVESQ8NE79 360 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 CAPNS2Q96L46 248 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 GMLQ99445 158 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 ADARB2Q9NS39 739 aaKnown RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 GPRC5DQ9NZD1 345 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 APEX2Q9UBZ4 518 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 TRMT112Q9UI30 125 aaKnown RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 AKT3Q9Y243 479 aa6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 DDX60Q8IY21 1712 aaKnown RBP6.7□□□□□ -1.34
RNU4-4P-201ENST00000364588 THSD7BQ9C0I4 1608 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 A0A1W2PQJ5 194 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 SHTN1A0MZ66 631 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 BBOX1O75936 387 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 ECE1P42892 770 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 MAP2K1Q02750 393 aaPredicted RBP6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 GRAPQ13588 217 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 RALBP1Q15311 655 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 DPY19L1Q2PZI1 675 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 CIAPIN1Q6FI81 312 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 KRTAP1-3Q8IUG1 177 aa6.69□□□□□ -1.34
RNU4-4P-201ENST00000364588 SP8Q8IXZ3 490 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms