RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ARTNQ5T4W7 220 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 ESRP1Q6NXG1 681 aaKnown RBP7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 PAQR3Q6TCH7 311 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 MILR1Q7Z6M3 343 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 TRIM48Q8IWZ4 208 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZNF610Q8N9Z0 462 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 PEX11GQ96HA9 241 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 RNF32Q9H0A6 362 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 TOPORSQ9NS56 1045 aaPredicted RBP7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 FAN1Q9Y2M0 1017 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 NOC2LQ9Y3T9 749 aaKnown RBP7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 C3P01024 1663 aa7.43□□□□□ -1.22
RNU4-39P-201ENST00000362455 SPATA31D1Q6ZQQ2 1576 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 KIDINS220Q9ULH0 1771 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 LCHNA4D1U4 455 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 TSPAN6O43657 245 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 SDHBP21912 280 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 ERVFRD-1P60508 538 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 GRIN1Q05586 938 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 PIN1Q13526 163 aaPredicted RBP7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 PTPN21Q16825 1174 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 ARRDC4Q8NCT1 418 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 ABHD4Q8TB40 342 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZDHHC5Q9C0B5 715 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 PDGFDQ9GZP0 370 aaPredicted RBP7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZFP64Q9NPA5 681 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZIM2Q9NZV7 527 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 CFDP1Q9UEE9 299 aaPredicted RBP7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 WASHC2AQ641Q2 1341 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 KIAA1107Q9UPP5 1409 aa7.42□□□□□ -1.22
RNU4-39P-201ENST00000362455 MYO5CQ9NQX4 1742 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 PRAMEF25A6NGN4 478 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 RASSF10A6NK89 507 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 SCGB1D2O95969 90 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 CD40P25942 277 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 SDHAP31040 664 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 SCAND1P57086 179 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 LRRC32Q14392 662 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 CMIPQ8IY22 773 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 FUBP3Q96I24 572 aaKnown RBP eCLIP7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 DBR1Q9UK59 544 aaKnown RBP7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 YBX2Q9Y2T7 364 aaKnown RBP7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 CDC42BPBQ9Y5S2 1711 aa7.41□□□□□ -1.22
RNU4-39P-201ENST00000362455 E2F8A0AVK6 867 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 NUDT19A8MXV4 375 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 FZD9O00144 591 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 ACOT7O00154 380 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 FOXP2O15409 715 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 KDM1AO60341 852 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 FNTBP49356 437 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 ZZZ3Q8IYH5 903 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 C1orf162Q8NEQ5 155 aaPredicted RBP7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 FLAD1Q8NFF5 587 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 TTLL11Q8NHH1 800 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 RTFDC1Q9BY42 306 aaPredicted RBP7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 CDH19Q9H159 772 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 HCFC2Q9Y5Z7 792 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 A2MP01023 1474 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 PLA2R1Q13018 1463 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 MBD5Q9P267 1494 aa7.4□□□□□ -1.22
RNU4-39P-201ENST00000362455 LRRIQ1Q96JM4 1722 aa7.4□□□□□ -1.23
RNU4-39P-201ENST00000362455 SETD1BQ9UPS6 1966 aaKnown RBP7.4□□□□□ -1.23
RNU4-39P-201ENST00000362455 PREX2Q70Z35 1606 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 SYCP2Q9BX26 1530 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 GOLGA8AA7E2F4 631 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 GOLGA8BA8MQT2 603 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 ZBTB7AO95365 584 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 MPOP05164 745 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 MMEP08473 750 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 TMEM253P0C7T8 217 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 AFMP43652 599 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 NR1I3Q14994 352 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 RAB3GAP1Q15042 981 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 PDCD1Q15116 288 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 EPHA7Q15375 998 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 PAN2Q504Q3 1202 aaKnown RBP7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 ADGRF1Q5T601 910 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 RPTNQ6XPR3 784 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 FRMD7Q6ZUT3 714 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 WDR75Q8IWA0 830 aaKnown RBP7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 CHPFQ8IZ52 775 aa7.39□□□□□ -1.23
RNU4-39P-201ENST00000362455 PLXNC1O60486 1568 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 CCDC18Q5T9S5 1454 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 DHX29Q7Z478 1369 aaKnown RBP7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 PRR5P85299 388 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 SLC9A5Q14940 896 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCBP2Q15366 365 aaKnown RBP eCLIP7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 PGM2L1Q6PCE3 622 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 ABI1Q8IZP0 508 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 LMBR1Q8WVP7 490 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 ASB15Q8WXK1 588 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 TSPAN17Q96FV3 270 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 INTS4Q96HW7 963 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms