RNA–Protein interactions for RNA: ENST00000361642.9

ZEB1-202, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZEB1, Length 5,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-202ENST00000361642 SHHQ15465 462 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 INF2Q27J81 1249 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 MSANTD4Q8NCY6 345 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 RNF34Q969K3 372 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 RPGRIP1Q96KN7 1286 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 UROC1Q96N76 676 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 TUT1Q9H6E5 874 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 BRD9Q9H8M2 597 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 TMEM260Q9NX78 707 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 IGSF9Q9P2J2 1179 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 NEDD4P46934 1319 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 SYNRGQ9UMZ2 1314 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 COL4A5P29400 1685 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 PHACTR2O75167 634 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 BEX3Q00994 111 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 LMNB2Q03252 620 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 XKR9Q5GH70 373 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 DAB2IPQ5VWQ8 1189 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 ANKRD33Q7Z3H0 272 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 MCPH1Q8NEM0 835 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 FLCNQ8NFG4 579 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 ACER1Q8TDN7 264 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 OTUD7AQ8TE49 926 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 BCAS3Q9H6U6 928 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 MTMR10Q9NXD2 777 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 DDX39AO00148 427 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 GLUD1P00367 558 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 TECP42680 631 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 GABPAQ06546 454 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 SYCP1Q15431 976 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 RPAINQ86UA6 219 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 FANCBQ8NB91 859 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 LEO1Q8WVC0 666 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 DDX27Q96GQ7 796 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 LIMCH1Q9UPQ0 1083 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 SMCO2A6NFE2 343 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 ORC2Q13416 577 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 SUZ12Q15022 739 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 POSTNQ15063 836 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 ZNF410Q86VK4 478 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 DCP1BQ8IZD4 617 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 PGBD3Q8N328 593 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 MRPL38Q96DV4 380 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 C8orf76Q96K31 380 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 ZNF512Q96ME7 567 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 PORCNQ9H237 461 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 RPF1Q9H9Y2 349 aaKnown RBP5.67□□□□□ -1.5
ZEB1-202ENST00000361642 PRM3Q9NNZ6 103 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 KDM3AQ9Y4C1 1321 aa5.67□□□□□ -1.5
ZEB1-202ENST00000361642 PPFIA3O75145 1194 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 NEK4P51957 841 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 EPHB3P54753 998 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 STK3Q13188 491 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 TPD52L1Q16890 204 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 DCAF4L1Q3SXM0 396 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 LRRC45Q96CN5 670 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PDHBP11177 359 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 KARSQ15046 597 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PAN2Q504Q3 1202 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 MAMDC4Q6UXC1 1216 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 DSTYKQ6XUX3 929 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 TSHZ1Q6ZSZ6 1077 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SKAP1Q86WV1 359 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 DDX50Q9BQ39 737 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SFXN1Q9H9B4 322 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 TLR9Q9NR96 1032 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 AKAP7Q9P0M2 348 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SMIM22K7EJ46 135 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PRPF3O43395 683 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SLC16A2P36021 539 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 LRCH2Q5VUJ6 765 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 KIAA0319Q5VV43 1072 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 NOTUMQ6P988 496 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 NUP88Q99567 741 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 GDF15Q99988 308 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 RNF26Q9BY78 433 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 LSG1Q9H089 658 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 MYH1P12882 1939 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SALL3Q9BXA9 1300 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SLC9A3R1O14745 358 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 CCDC192P0DO97 292 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PSMD2Q13200 908 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 HNRNPDQ14103 355 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 KIZQ2M2Z5 673 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 ZNF792Q3KQV3 632 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PRAMEF19Q5SWL8 479 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 TRMT11Q7Z4G4 463 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SRGAP1Q7Z6B7 1085 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 CCDC84Q86UT8 332 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 TBC1D10CQ8IV04 446 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 SRBD1Q8N5C6 995 aaKnown RBP5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PIGSQ96S52 555 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PTPN18Q99952 460 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 PDCL3Q9H2J4 239 aa5.66□□□□□ -1.5
ZEB1-202ENST00000361642 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms