RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 LRRC57Q8N9N7 239 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 SLC35C1Q96A29 364 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 SIPA1L1O43166 1804 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 SPDYE3A6NKU9 549 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 BTNL10A8MVZ5 291 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 NDUFB10O96000 172 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 CCT5P48643 541 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 EIF3HO15372 352 aaKnown RBP eCLIP17■□□□□ 0.31
CNKSR1-201ENST00000361530 CALUO43852 315 aaPredicted RBP17■□□□□ 0.31
CNKSR1-201ENST00000361530 KIF4AO95239 1232 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
CNKSR1-201ENST00000361530 CFAP58Q5T655 872 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 PCDHB13Q9Y5F0 798 aa17■□□□□ 0.31
CNKSR1-201ENST00000361530 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 GCNT3O95395 438 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 ZBTB48P10074 688 aaPredicted RBP16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 TATDN1Q6P1N9 297 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 EFCAB13Q8IY85 973 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 BCAS4Q8TDM0 211 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 PIGOQ8TEQ8 1089 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 TAF4BQ92750 862 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 FAM20AQ96MK3 541 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 TYW1Q9NV66 732 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 ZBTB39O15060 712 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 TGFB1I1O43294 461 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 PRKCIP41743 596 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 BMT2Q1RMZ1 405 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 C10orf76Q5T2E6 689 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 GBP6Q6ZN66 633 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 NENFQ9UMX5 172 aa16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 BZW2Q9Y6E2 419 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-201ENST00000361530 CEP104O60308 925 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 ATP1A2P50993 1020 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 JAM2P57087 298 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 SKOR1P84550 965 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 PDCLQ13371 301 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 SYDE2Q5VT97 1194 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 TPCN2Q8NHX9 752 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 SCFD2Q8WU76 684 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 AP1M1Q9BXS5 423 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 GCNT4Q9P109 453 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 SMCHD1A6NHR9 2005 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 ANKRD31Q8N7Z5 1873 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 CIITAP33076 1130 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 TADA2BQ86TJ2 420 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 MREGQ8N565 214 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 BORCS6Q96GS4 357 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
CNKSR1-201ENST00000361530 DDX3XO00571 662 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 FOSP01100 380 aaPredicted RBP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 TNNC1P63316 161 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 ZC2HC1CQ53FD0 456 aaPredicted RBP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 RINT1Q6NUQ1 792 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 TMEM179Q6ZVK1 233 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 DDX42Q86XP3 938 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 KSR1Q8IVT5 923 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 METTL13Q8N6R0 699 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 TBCAO75347 108 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 EYA4O95677 639 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 NPR1P16066 1061 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 ECHS1P30084 290 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 LIG3P49916 1009 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 ABCB5Q2M3G0 1257 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 SPICE1Q8N0Z3 855 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 IDI2Q9BXS1 227 aa16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 METTL14Q9HCE5 456 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-201ENST00000361530 A0A1W2PRG0 241 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 CES2O00748 559 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 ZNF76P36508 570 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 GMCL1P1Q8NEA9 526 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 GMCL1Q96IK5 515 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 POLR3CQ9BUI4 534 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 ZMYM2Q9UBW7 1377 aa16.96■□□□□ 0.31
CNKSR1-201ENST00000361530 IGLV3-22A0A075B6J6 115 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 A0A087WUV0 522 aaPredicted RBP16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 FAM170AA1A519 330 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 EBAG9O00559 213 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 FLOT1O75955 427 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 GFPT2O94808 682 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 COG2Q14746 738 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 OLIG1Q8TAK6 271 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 ACTRT1Q8TDG2 376 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 WHAMMQ8TF30 809 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 PBKQ96KB5 322 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 RNPC3Q96LT9 517 aaKnown RBP16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 HSD17B14Q9BPX1 270 aa16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.3
CNKSR1-201ENST00000361530 SLC16A3O15427 465 aaKnown RBP16.95■□□□□ 0.3
CNKSR1-201ENST00000361530 SLITRK3O94933 977 aa16.95■□□□□ 0.3
CNKSR1-201ENST00000361530 GH2P01242 217 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms