RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZBTB38Q8NAP3 1195 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-203ENST00000359759 EDEM3Q9BZQ6 932 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 RASSF3Q86WH2 238 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 AGR3Q8TD06 166 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 AK8Q96MA6 479 aa17.18■□□□□ 0.34
COL18A1-203ENST00000359759 TMEM247A6NEH6 219 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 CCDC159P0C7I6 412 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ZBED6P86452 979 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 DEUP1Q05D60 604 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 SLC17A8Q8NDX2 589 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 OTULINQ96BN8 352 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 UHRF1BP1Q6BDS2 1440 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 MYO1CO00159 1063 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ZSCAN9O15535 394 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 PRKAB2O43741 272 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 NEK2P51955 445 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 RBBP7Q16576 425 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ERICH1Q86X53 443 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 WDR75Q8IWA0 830 aaKnown RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 HEY1Q9Y5J3 304 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 TTLL1O95922 423 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 MYCP01106 439 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 MXI1P50539 228 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 MYO1EQ12965 1108 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ACBD5Q5T8D3 534 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ARL8AQ96BM9 186 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 KLC2Q9H0B6 622 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 DDX28Q9NUL7 540 aaKnown RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 MID2Q9UJV3 735 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 CHGBP05060 677 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 FSCBQ5H9T9 825 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 KIAA1841Q6NSI8 718 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 LZICQ8WZA0 190 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 PANX2Q96RD6 677 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ABCC4O15439 1325 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 RNF103-CHMP3A0A140T963 221 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 CTIFO43310 598 aaKnown RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 GFPT1Q06210 699 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ASPRV1Q53RT3 343 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 KIAA2013Q8IYS2 634 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
COL18A1-203ENST00000359759 NACC1Q96RE7 527 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 NDST4Q9H3R1 872 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 ADAMTS1Q9UHI8 967 aa17.17■□□□□ 0.34
COL18A1-203ENST00000359759 WBP4O75554 376 aaKnown RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 TJP3O95049 919 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 PAMP19021 973 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 KDM1AO60341 852 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ZSCAN20P17040 1043 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 COPS2P61201 443 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 NGRNQ9NPE2 291 aaKnown RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 SSTR3P32745 418 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 LBRQ14739 615 aaKnown RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 DCAF15Q66K64 600 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 MMS22LQ6ZRQ5 1243 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 RINLQ6ZS11 566 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 PRPF38AQ8NAV1 312 aaKnown RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ZNF507Q8TCN5 953 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 PARVGQ9HBI0 331 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 NCK2O43639 380 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 VCPP55072 806 aaKnown RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 AP2B1P63010 937 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 RNF135Q8IUD6 432 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ZNF229Q9UJW7 825 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ANAPC7Q9UJX3 599 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
COL18A1-203ENST00000359759 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 KCTD2Q14681 263 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 CCNYL1Q8N7R7 359 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ICA1LQ8NDH6 482 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 AIFM3Q96NN9 605 aa17.16■□□□□ 0.34
COL18A1-203ENST00000359759 ZFXP17010 805 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 BAG6P46379 1132 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 EFTUD2Q15029 972 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■■□ 25.5
COL18A1-203ENST00000359759 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 KLHL8Q9P2G9 620 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 RAD23BP54727 409 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 TGS1Q96RS0 853 aaKnown RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 MSTO1Q9BUK6 570 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 OCM2P0CE71 109 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 OCMP0CE72 109 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 OR6B3Q8NGW1 331 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 LBHD1Q9BQE6 289 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 GGT7Q9UJ14 662 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms