RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CD248Q9HCU0 757 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 BANF1O75531 89 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 MOCS3O95396 460 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 IFIT5Q13325 482 aaKnown RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 SYCP1Q15431 976 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 NELFCDQ8IXH7 590 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 OCEL1Q9H607 264 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 PLXNA4Q9HCM2 1894 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 SAE1Q9UBE0 346 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 CTNND2Q9UQB3 1225 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 KIF26AQ9ULI4 1882 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 ZBTB43O43298 467 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CNMDO75829 334 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CYP7A1P22680 504 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 DRP2Q13474 957 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CCDC152Q4G0S7 254 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 HHIPL2Q6UWX4 724 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CCDC112Q8NEF3 446 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CNKSR2Q8WXI2 1034 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 SEC14L1Q92503 715 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 SHROOM3Q8TF72 1996 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 RIMBP2O15034 1052 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 PLCG1P19174 1290 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 TFAP4Q01664 338 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 CCDC57Q2TAC2 916 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 PLEKHG4Q58EX7 1191 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 ZBTB41Q5SVQ8 909 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 POTEGQ6S5H5 508 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 LBX2Q6XYB7 198 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 PIGOQ8TEQ8 1089 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 JDP2Q8WYK2 163 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 ARHGEF26Q96DR7 871 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 TMEM47Q9BQJ4 181 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 WDR83Q9BRX9 315 aaKnown RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 FBXO3Q9UK99 471 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 AGAP1Q9UPQ3 857 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 IGF2RP11717 2491 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 ARID2Q68CP9 1835 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 SMTNL1A8MU46 457 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 GJB1P08034 283 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 EHHADHQ08426 723 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 UBE4AQ14139 1066 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 CT47A1Q5JQC4 288 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 NBPF12Q5TAG4 269 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 FEZF2Q8TBJ5 459 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 ABHD10Q9NUJ1 306 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 DAGLAQ9Y4D2 1042 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 LRRC10BA6NIK2 292 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 TPM2P07951 284 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 APOBEC3FQ8IUX4 373 aaKnown RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 FAM184AQ8NB25 1140 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 ACSF2Q96CM8 615 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 GPR88Q9GZN0 384 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 PLCB1Q9NQ66 1216 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 LRWD1Q9UFC0 647 aa6.29□□□□□ -1.4
CD47-201ENST00000355354 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
CD47-201ENST00000355354 GRB10Q13322 594 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 PICALMQ13492 652 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 CASP8Q14790 479 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 HSF5Q4G112 596 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 CBWD6Q4V339 395 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 CBWD3Q5JTY5 395 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 CBWD5Q5RIA9 395 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 KLHDC7AQ5VTJ3 777 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 SAMD1Q6SPF0 538 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 ERC1Q8IUD2 1116 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 DHX38Q92620 1227 aaKnown RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 GNL3LQ9NVN8 582 aaKnown RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 ZNF70Q9UC06 446 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 LIMA1Q9UHB6 759 aaKnown RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 RSPH14Q9UHP6 348 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 APC2O95996 2303 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 POTEB3A0JP26 581 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ATP9AO75110 1047 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 MED24O75448 989 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 AKAP3O75969 853 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 IL15P40933 162 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 PHKA2P46019 1235 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ERVK-9P63128 1117 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ACTN3Q08043 901 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 VGLL4Q14135 290 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 SAFBQ15424 915 aaKnown RBP eCLIP6.28□□□□□ -1.4
CD47-201ENST00000355354 CPLX2Q6PUV4 134 aaKnown RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 POTEBQ6S5H4 581 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 RDH13Q8NBN7 331 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 PIGSQ96S52 555 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 EYA3Q99504 573 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 AP1M1Q9BXS5 423 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ARHGAP39Q9C0H5 1083 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 DEFB129Q9H1M3 183 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 PIDD1Q9HB75 910 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 CNNM1Q9NRU3 951 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 SIK3Q9Y2K2 1263 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 TP53BP1Q12888 1972 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms