RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 TELO2Q9Y4R8 837 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SFI1A8K8P3 1242 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 RSPH10B2B2RC85 870 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 RSPH10BP0C881 870 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 FANCCQ00597 558 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 MAP2K5Q13163 448 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 PKN2Q16513 984 aaKnown RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 CELF3Q5SZQ8 465 aaKnown RBP19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SFR1Q86XK3 245 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 ANKRD20A12PQ8NF67 263 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 PARVGQ9HBI0 331 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 ODF2LQ9ULJ1 636 aa19.21■□□□□ 0.67
CLDN4-201ENST00000340958 SYNGAP1Q96PV0 1343 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 FRMD3A2A2Y4 597 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 TMEM150BA6NC51 233 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 TRIM49BA6NDI0 452 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 CBFA2T2O43439 604 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 CCNE1P24864 410 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 PRKCEQ02156 737 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 EHHADHQ08426 723 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 COBLL1Q53SF7 1204 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 GUF1Q8N442 669 aaKnown RBP19.2■□□□□ 0.66
CLDN4-201ENST00000340958 PDLIM2Q96JY6 352 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 MED15Q96RN5 788 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 TSG101Q99816 390 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 TINF2Q9BSI4 451 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 IFNKQ9P0W0 207 aa19.2■□□□□ 0.66
CLDN4-201ENST00000340958 ZHX1Q9UKY1 873 aaPredicted RBP19.2■□□□□ 0.66
CLDN4-201ENST00000340958 ATG7O95352 703 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 TCF7P36402 384 aaPredicted RBP19.19■□□□□ 0.66
CLDN4-201ENST00000340958 FCGRTP55899 365 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 UBASH3AP57075 661 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 ARHGEF6Q15052 776 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 FBXO46Q6PJ61 603 aaPredicted RBP19.19■□□□□ 0.66
CLDN4-201ENST00000340958 MAMDC4Q6UXC1 1216 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 SPC24Q8NBT2 197 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 NPLOC4Q8TAT6 608 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 GLG1Q92896 1179 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 HSD3B7Q9H2F3 369 aa19.19■□□□□ 0.66
CLDN4-201ENST00000340958 HIP1RO75146 1068 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 GCNT3O95395 438 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 TPM3P06753 285 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 RGS2P41220 211 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 STAT5BP51692 787 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 NPEPPSP55786 919 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 XKR3Q5GH77 459 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 MORN1Q5T089 497 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 ANO5Q75V66 913 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 CSGALNACT2Q8N6G5 542 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 COPS5Q92905 334 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 ABHD8Q96I13 439 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 MAGEC2Q9UBF1 373 aaPredicted RBP19.18■□□□□ 0.66
CLDN4-201ENST00000340958 PTPN22Q9Y2R2 807 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 GSTTP1A0A1W2PQM5 241 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 GOLGA6L6A8MZA4 724 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 ZNF862O60290 1169 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 CYP2B6P20813 491 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 PMS1P54277 932 aaKnown RBP19.18■□□□□ 0.66
CLDN4-201ENST00000340958 ODR4Q5SWX8 454 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 FAM102BQ5T8I3 360 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 CCDC62Q6P9F0 684 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 NELFCDQ8IXH7 590 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 MSL3Q8N5Y2 521 aaKnown RBP19.18■□□□□ 0.66
CLDN4-201ENST00000340958 SOCS4Q8WXH5 440 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 ABHD16BQ9H3Z7 469 aa19.18■□□□□ 0.66
CLDN4-201ENST00000340958 DOCK5Q9H7D0 1870 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 IGSF9BQ9UPX0 1349 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 SNAI1O95863 264 aaPredicted RBP19.17■□□□□ 0.66
CLDN4-201ENST00000340958 GNRH1P01148 92 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 ANKRD40Q6AI12 368 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 TAPT1Q6NXT6 567 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 STXBP4Q6ZWJ1 553 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.17■□□□□ 0.66
CLDN4-201ENST00000340958 FAM178BQ8IXR5 827 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 GLIS3Q8NEA6 775 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 NOC3LQ8WTT2 800 aaKnown RBP19.17■□□□□ 0.66
CLDN4-201ENST00000340958 MRFAP1L1Q96HT8 127 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 DRC1Q96MC2 740 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 GPR20Q99678 358 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 TIPINQ9BVW5 301 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 SRRTQ9BXP5 876 aaKnown RBP19.17■□□□□ 0.66
CLDN4-201ENST00000340958 XPO4Q9C0E2 1151 aaKnown RBP19.17■□□□□ 0.66
CLDN4-201ENST00000340958 NRBP2Q9NSY0 501 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 SEL1LQ9UBV2 794 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 PCDHA2Q9Y5H9 948 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 MAFBQ9Y5Q3 323 aaPredicted RBP19.17■□□□□ 0.66
CLDN4-201ENST00000340958 PLXNA1Q9UIW2 1896 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 LRRC37A2A6NM11 1700 aa19.17■□□□□ 0.66
CLDN4-201ENST00000340958 FGFR1OPO95684 399 aaKnown RBP19.16■□□□□ 0.66
CLDN4-201ENST00000340958 GH1P01241 217 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 OATP04181 439 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 ZNF18P17022 549 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 ADCYAP1R1P41586 468 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 SPAG1Q07617 926 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 ACVR2BQ13705 512 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 LAMC2Q13753 1193 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 HSDL1Q3SXM5 330 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 MTERF2Q49AM1 385 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms