RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 RPS6KA2Q15349 733 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 PADI6Q6TGC4 694 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 C1orf167Q5SNV9 1468 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 EXOC1LA0A1B0GW35 172 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 GOLGA8IPA6NC78 632 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 GOLGA8JA6NMD2 632 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 WDR64B1ANS9 1081 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 TDP2O95551 362 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 GPC5P78333 572 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 KCNB2Q92953 911 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 ZNF341Q9BYN7 854 aa18.41■□□□□ 0.54
TRAPPC11-201ENST00000334690 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 GABPAQ06546 454 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 RNF207Q6ZRF8 634 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 PDIK1LQ8N165 341 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 STAG2Q8N3U4 1231 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 WDR24Q96S15 920 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 CALN1Q9BXU9 219 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 EFCC1Q9HA90 598 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 GRID2IPA4D2P6 1211 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 ADSSL1Q8N142 457 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 AFG3L2Q9Y4W6 797 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 ITIH6Q6UXX5 1313 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 CASQ2O14958 399 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 MAP7Q14244 749 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 PLAAQ9Y263 795 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 RFX1P22670 979 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 KRT76Q01546 638 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 PPP2R5CQ13362 524 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 MTMR1Q13613 665 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 TMED2Q15363 201 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 TCP11Q8WWU5 503 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 CPSF2Q9P2I0 782 aaKnown RBP18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 AKT3Q9Y243 479 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 TAF6LQ9Y6J9 622 aa18.4■□□□□ 0.54
TRAPPC11-201ENST00000334690 PALM3A6NDB9 673 aaPredicted RBP18.39■□□□□ 0.54
TRAPPC11-201ENST00000334690 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.54
TRAPPC11-201ENST00000334690 SNAP25P60880 206 aa18.39■□□□□ 0.54
TRAPPC11-201ENST00000334690 PDIA6Q15084 440 aa18.39■□□□□ 0.54
TRAPPC11-201ENST00000334690 ADGRF4Q8IZF3 695 aa18.39■□□□□ 0.54
TRAPPC11-201ENST00000334690 TTLL6Q8N841 843 aa18.39■□□□□ 0.54
TRAPPC11-201ENST00000334690 POTEFA5A3E0 1075 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 MT-ND3P03897 115 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 POTEIP0CG38 1075 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 POTEGQ6S5H5 508 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 RNF169Q8NCN4 708 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 MSTO1Q9BUK6 570 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 CNOT8Q9UFF9 292 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 RMDN3Q96TC7 470 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 TDRD3Q9H7E2 651 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 SEPT10Q9P0V9 454 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 USH1CQ9Y6N9 552 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 BASP1P80723 227 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 DPYDQ12882 1025 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 MTF1Q14872 753 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 ADAM22Q9P0K1 906 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 NUB1Q9Y5A7 615 aa18.39■□□□□ 0.53
TRAPPC11-201ENST00000334690 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 FMR1Q06787 632 aaKnown RBP eCLIP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 CENPUQ71F23 418 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 ENGASEQ8NFI3 743 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 ANAPC7Q9UJX3 599 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 SNX24Q9Y343 169 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 TARSL2A2RTX5 802 aaKnown RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 CPP00450 1065 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 GCLMP48507 274 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 MRPS25P82663 173 aaKnown RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 ANKRD40Q6AI12 368 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 ABCB11O95342 1321 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 IPO5O00410 1097 aaKnown RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 RHOBTB3O94955 611 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 LUC7L3O95232 432 aaKnown RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 P4HBP07237 508 aaKnown RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 CD58P19256 250 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 ARL4AP40617 200 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 PDCLQ13371 301 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 NFRKBQ6P4R8 1299 aa18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 ELOA2Q8IYF1 753 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 GBP7Q8N8V2 638 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC11-201ENST00000334690 SH3BP5O60239 455 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 FCER1AP12319 257 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 SESTD1Q86VW0 696 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 RPS6KC1Q96S38 1066 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 CA4P22748 312 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 NR1I3Q14994 352 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 TMEM35BQ8NCS4 154 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 TBK1Q9UHD2 729 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 QARSP47897 775 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 SH2D4BQ5SQS7 431 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
TRAPPC11-201ENST00000334690 RASGRP2Q7LDG7 609 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms