RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ABCB11O95342 1321 aa11.33□□□□□ -0.6
ABCF1-201ENST00000326195 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 APLP1P51693 650 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 SLC7A5Q01650 507 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 GRIK3Q13003 919 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 CRYMQ14894 314 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 CNGA4Q8IV77 575 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 SCLT1Q96NL6 688 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 CXCL11O14625 94 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 SNHG28P0DPA3 235 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 ERCC5P28715 1186 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 GNA11P29992 359 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 CDC25CP30307 473 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 SARNPP82979 210 aaKnown RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 CRHR2Q13324 411 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 FAM160B2Q86V87 743 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 LZTS2Q9BRK4 669 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 BEGAINQ9BUH8 593 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 RBPJLQ9UBG7 517 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 ADD3Q9UEY8 706 aaKnown RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 CDK5RAP2Q96SN8 1893 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 A0A0G2JLL6 359 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 UBXN1Q04323 297 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 GJC2Q5T442 439 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 ARHGEF16Q5VV41 709 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 B4GALNT4Q76KP1 1039 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 PRRT2Q7Z6L0 340 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 BORCS6Q96GS4 357 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 RMDN3Q96TC7 470 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 TEX13BQ9BXU2 312 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 TPX2Q9ULW0 747 aaKnown RBP11.32□□□□□ -0.6
ABCF1-201ENST00000326195 PCDHA4Q9UN74 947 aa11.32□□□□□ -0.6
ABCF1-201ENST00000326195 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 DNM1LO00429 736 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 CNGA1P29973 690 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 LSP1P33241 339 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 MORC3Q14149 939 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 CAGE1Q8TC20 777 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 ZNF473Q8WTR7 871 aaKnown RBP11.31□□□□□ -0.6
ABCF1-201ENST00000326195 NAA15Q9BXJ9 866 aaKnown RBP11.31□□□□□ -0.6
ABCF1-201ENST00000326195 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 SARSP49591 514 aaKnown RBP11.31□□□□□ -0.6
ABCF1-201ENST00000326195 PAK1Q13153 545 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 NAA25Q14CX7 972 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 PAGE5Q96GU1 130 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 GSDMAQ96QA5 445 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 HAUS2Q9NVX0 235 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
ABCF1-201ENST00000326195 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 SKOR1P84550 965 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 KCTD2Q14681 263 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 GPAT2Q6NUI2 795 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 CYB5D1Q6P9G0 228 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 TATDN2Q93075 761 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 LRRC1Q9BTT6 524 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
ABCF1-201ENST00000326195 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
ABCF1-201ENST00000326195 PEX19P40855 299 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 NONOQ15233 471 aaKnown RBP eCLIP11.3□□□□□ -0.6
ABCF1-201ENST00000326195 PARP9Q8IXQ6 854 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 BCAS3Q9H6U6 928 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 ABHD10Q9NUJ1 306 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 TCEAL9Q9UHQ7 104 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 FAM237AA0A1B0GTK4 181 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
ABCF1-201ENST00000326195 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 PSMA7O14818 248 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 KRT9P35527 623 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 TECP42680 631 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
ABCF1-201ENST00000326195 CYP4A11Q02928 519 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 ANO3Q9BYT9 981 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 PCDH10Q9P2E7 1040 aa11.3□□□□□ -0.6
ABCF1-201ENST00000326195 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms