RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 KRT25Q7Z3Z0 450 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 PPP2R3CQ969Q6 453 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
MSL3-201ENST00000312196 C11orf16Q9NQ32 467 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 NRBP2Q9NSY0 501 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 TMEM260Q9NX78 707 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 BRCA2P51587 3418 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 WDR64B1ANS9 1081 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 PFKFB2O60825 505 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 DKC1O60832 514 aaKnown RBP eCLIP9.55□□□□□ -0.88
MSL3-201ENST00000312196 LINC00271P0C7V0 271 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 BMPR1AP36894 532 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 GDPD5Q8WTR4 605 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 WASF1Q92558 559 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 ZNF577Q9BSK1 485 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 IRF2BPLQ9H1B7 796 aa9.55□□□□□ -0.88
MSL3-201ENST00000312196 ZBTB42B2RXF5 422 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 DCXO43602 365 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 EDIL3O43854 480 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 DGKIO75912 1065 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 MMP1P03956 469 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 SARSP49591 514 aaKnown RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 SMAD4Q13485 552 aaKnown RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 DSC3Q14574 896 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 FIBCD1Q8N539 461 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 TRAIPQ9BWF2 469 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 RGS18Q9NS28 235 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 TELO2Q9Y4R8 837 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 WDR81Q562E7 1941 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 ADGRA3Q8IWK6 1321 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 hCG_1642624A0A1W2PR95 340 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 GPR182O15218 404 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 C22orf31O95567 290 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 EYA4O95677 639 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 CHMP4BP1P59074 171 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 SMAD2Q15796 467 aaKnown RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 HERC4Q5GLZ8 1057 aaPredicted RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 JAKMIP3Q5VZ66 844 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 PPP4R3AQ6IN85 833 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 KIAA0319LQ8IZA0 1049 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 CYP2W1Q8TAV3 490 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 DNAJB3Q8WWF6 145 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 ZFP91Q96JP5 570 aaPredicted RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 FAM20AQ96MK3 541 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 CDCA3Q99618 268 aaPredicted RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 JPH2Q9BR39 696 aaPredicted RBP9.54□□□□□ -0.88
MSL3-201ENST00000312196 TEKT3Q9BXF9 490 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 TRPC6Q9Y210 931 aa9.54□□□□□ -0.88
MSL3-201ENST00000312196 TTC3P53804 2025 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 HOXA2O43364 376 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 PSMD10O75832 226 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 ATP4AP20648 1035 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 ZP2Q05996 745 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 CBX2Q14781 532 aaPredicted RBP9.53□□□□□ -0.88
MSL3-201ENST00000312196 TARBP2Q15633 366 aaKnown RBP9.53□□□□□ -0.88
MSL3-201ENST00000312196 PDXDC2PQ6P474 469 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 RAB11FIP4Q86YS3 637 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 BLIDQ8IZY5 108 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 NECAB3Q96P71 396 aaPredicted RBP9.53□□□□□ -0.88
MSL3-201ENST00000312196 YME1L1Q96TA2 773 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 SLC26A6Q9BXS9 759 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 IGKV6-21A0A0C4DH24 114 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 XBP1P17861 261 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 KLRC1P26715 233 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 PAK2Q13177 524 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 ORC2Q13416 577 aaPredicted RBP9.53□□□□□ -0.88
MSL3-201ENST00000312196 NPY5RQ15761 445 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 CCDC60Q8IWA6 550 aaPredicted RBP9.53□□□□□ -0.88
MSL3-201ENST00000312196 LINC01599Q8WXQ3 324 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 MFSD14AQ96MC6 490 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 C17orf80Q9BSJ5 609 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 PHF20Q9BVI0 1012 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 CERS4Q9HA82 394 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 LZTS1Q9Y250 596 aa9.53□□□□□ -0.88
MSL3-201ENST00000312196 ZMYM2Q9UBW7 1377 aa9.52□□□□□ -0.88
MSL3-201ENST00000312196 MSH4O15457 936 aa9.52□□□□□ -0.89
MSL3-201ENST00000312196 SORBS3O60504 671 aa9.52□□□□□ -0.89
MSL3-201ENST00000312196 ATF7P17544 494 aaPredicted RBP9.52□□□□□ -0.89
MSL3-201ENST00000312196 NLRP5P59047 1200 aa9.52□□□□□ -0.89
MSL3-201ENST00000312196 COASYQ13057 564 aa9.52□□□□□ -0.89
MSL3-201ENST00000312196 ADAM15Q13444 863 aa9.52□□□□□ -0.89
MSL3-201ENST00000312196 CHST12Q9NRB3 414 aa9.52□□□□□ -0.89
MSL3-201ENST00000312196 GAS2O43903 313 aaKnown RBP9.51□□□□□ -0.89
MSL3-201ENST00000312196 GPR32O75388 356 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 STBD1O95210 358 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 OATP04181 439 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 GHRP10912 638 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 TMOD1P28289 359 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 PPP2R5CQ13362 524 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 NONOQ15233 471 aaKnown RBP eCLIP9.51□□□□□ -0.89
MSL3-201ENST00000312196 PCBP1Q15365 356 aaKnown RBP eCLIP9.51□□□□□ -0.89
MSL3-201ENST00000312196 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
MSL3-201ENST00000312196 TCEAL5Q5H9L2 206 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms