RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 LRRC4Q9HBW1 653 aa18.58■□□□□ 0.57
CDCP1-201ENST00000296129 ARHGAP42A6NI28 874 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 PRPSAP2O60256 369 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 CPP00450 1065 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 MYL3P08590 195 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 HSPA6P17066 643 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 RNF10Q8N5U6 811 aaKnown RBP18.58■□□□□ 0.56
CDCP1-201ENST00000296129 CCDC68Q9H2F9 335 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 IPO11Q9UI26 975 aaKnown RBP18.58■□□□□ 0.56
CDCP1-201ENST00000296129 MAGED2Q9UNF1 606 aaPredicted RBP18.58■□□□□ 0.56
CDCP1-201ENST00000296129 ARPP19P56211 112 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 ATP2C1P98194 919 aaPredicted RBP18.58■□□□□ 0.56
CDCP1-201ENST00000296129 PDE1BQ01064 536 aa18.58■□□□□ 0.56
CDCP1-201ENST00000296129 NSUN6Q8TEA1 469 aaKnown RBP18.58■□□□□ 0.56
CDCP1-201ENST00000296129 PALMO75781 387 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 GCLMP48507 274 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 C4orf50Q6ZRC1 276 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 SIX6OS1Q8N1H7 587 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 CFAP57Q96MR6 1250 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 IL9RQ01113 521 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 MCPH1Q8NEM0 835 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 IQSEC2Q5JU85 1478 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 CHRNA5P30532 468 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 KRT76Q01546 638 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 GFPT1Q06210 699 aaPredicted RBP18.57■□□□□ 0.56
CDCP1-201ENST00000296129 SPP2Q13103 211 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 KNOP1Q1ED39 458 aaKnown RBP18.57■□□□□ 0.56
CDCP1-201ENST00000296129 ARHGEF18Q6ZSZ5 1173 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 VCXQ9H320 206 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 ZWILCHQ9H900 591 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 SMYD2Q9NRG4 433 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 TXNDC9O14530 226 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 CSF1RP07333 972 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 GSTA1P08263 222 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 GSTA2P09210 222 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 KCNH2Q12809 1159 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 SPATS2Q86XZ4 545 aaKnown RBP18.57■□□□□ 0.56
CDCP1-201ENST00000296129 RPUSD2Q8IZ73 545 aaKnown RBP18.57■□□□□ 0.56
CDCP1-201ENST00000296129 XXYLT1Q8NBI6 393 aa18.57■□□□□ 0.56
CDCP1-201ENST00000296129 GIMAP8Q8ND71 665 aaPredicted RBP18.57■□□□□ 0.56
CDCP1-201ENST00000296129 CLCN6P51797 869 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 RAPH1Q70E73 1250 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 ERICH1Q86X53 443 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 ZNF302Q9NR11 478 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 RHOT2Q8IXI1 618 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 MXD3Q9BW11 206 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 PFDN6O15212 129 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 MTRQ99707 1265 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 FAM213AQ9BRX8 229 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 SLCO1A2P46721 670 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 CCT5P48643 541 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 FAM167AQ96KS9 214 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
CDCP1-201ENST00000296129 APOBEC3FQ8IUX4 373 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 HSPH1Q92598 858 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 ABT1Q9ULW3 272 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 CLDN3O15551 220 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 MSH2P43246 934 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 ZNF394Q53GI3 561 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 DAGLAQ9Y4D2 1042 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 FLT1P17948 1338 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 P4HBP07237 508 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 RWDD2BP57060 319 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 CDO1Q16878 200 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 CCDC144BQ3MJ40 725 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 SWSAP1Q6NVH7 229 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 CATSPER4Q7RTX7 472 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 LXNQ9BS40 222 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 FBXO2Q9UK22 296 aaPredicted RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 FGGP02679 453 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 CLNS1AP54105 237 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 MRPS25P82663 173 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 NUF2Q9BZD4 464 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 GABBR1Q9UBS5 961 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 ATP8B3O60423 1300 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 NEK9Q8TD19 979 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 CCHCR1Q8TD31 782 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 EIF2AK1Q9BQI3 630 aaKnown RBP18.55■□□□□ 0.56
CDCP1-201ENST00000296129 SCINQ9Y6U3 715 aa18.55■□□□□ 0.56
CDCP1-201ENST00000296129 A0A1B0GUA9 196 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 DENND3A2RUS2 1198 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 PSMA2P25787 234 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
CDCP1-201ENST00000296129 PRR5LQ6MZQ0 368 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 OR6B3Q8NGW1 331 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 ABCB6Q9NP58 842 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 QARSP47897 775 aaKnown RBP18.54■□□□□ 0.56
CDCP1-201ENST00000296129 ZNF667Q5HYK9 610 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 IGDCC4Q8TDY8 1250 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 TACO1Q9BSH4 297 aaKnown RBP18.54■□□□□ 0.56
CDCP1-201ENST00000296129 TBK1Q9UHD2 729 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 SUGT1Q9Y2Z0 365 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 FCER1AP12319 257 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 DNAAF3Q8N9W5 541 aa18.54■□□□□ 0.56
CDCP1-201ENST00000296129 CCDC151A5D8V7 595 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms