RNA–Protein interactions for RNA: ENST00000290776.12

CPNE2-201, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-201ENST00000290776 BARGINQ6ZT62 677 aa23.04■■□□□ 1.28
CPNE2-201ENST00000290776 CCDC13Q8IYE1 715 aa23.04■■□□□ 1.28
CPNE2-201ENST00000290776 POLLQ9UGP5 575 aa23.04■■□□□ 1.28
CPNE2-201ENST00000290776 PLIN4Q96Q06 1357 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 FRMD3A2A2Y4 597 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 DDX3XO00571 662 aaKnown RBP eCLIP23.03■■□□□ 1.283e-8■■■■■ 40.9
CPNE2-201ENST00000290776 GCNT3O95395 438 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 NR3C1P04150 777 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 TAL1P17542 331 aaPredicted RBP23.03■■□□□ 1.28
CPNE2-201ENST00000290776 USP8P40818 1118 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 MAGOHP61326 146 aaKnown RBP23.03■■□□□ 1.28
CPNE2-201ENST00000290776 EPHA7Q15375 998 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 KRT71Q3SY84 523 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
CPNE2-201ENST00000290776 MAGOHBQ96A72 148 aaKnown RBP23.03■■□□□ 1.28
CPNE2-201ENST00000290776 SLC12A6Q9UHW9 1150 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 NR2E1Q9Y466 385 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 GMNCA6NCL1 334 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 ATP2C2O75185 946 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 FGGP02679 453 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 PDE4CQ08493 712 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 VPS36Q86VN1 386 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 CALR3Q96L12 384 aaKnown RBP23.03■■□□□ 1.28
CPNE2-201ENST00000290776 CEP89Q96ST8 783 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 MXD3Q9BW11 206 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 DNM3Q9UQ16 869 aa23.03■■□□□ 1.28
CPNE2-201ENST00000290776 FAM196BA6NMK8 535 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 ZBTB48P10074 688 aaPredicted RBP23.02■■□□□ 1.28
CPNE2-201ENST00000290776 SF3A3Q12874 501 aaKnown RBP eCLIP23.02■■□□□ 1.28
CPNE2-201ENST00000290776 C1orf131Q8NDD1 294 aaKnown RBP23.02■■□□□ 1.28
CPNE2-201ENST00000290776 SIX2Q9NPC8 291 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 DDX20Q9UHI6 824 aaKnown RBP23.02■■□□□ 1.28
CPNE2-201ENST00000290776 TRAF3IP3Q9Y228 551 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 ATP8A1Q9Y2Q0 1164 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 RGL2O15211 777 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 SCNN1DP51172 638 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 RUFY4Q6ZNE9 571 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 TMC3Q7Z5M5 1100 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 NT5DC3Q86UY8 548 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 GLYCTKQ8IVS8 523 aa23.02■■□□□ 1.28
CPNE2-201ENST00000290776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.02■■□□□ 1.287e-9■■■■■ 72.6
CPNE2-201ENST00000290776 FAM163AQ96GL9 167 aaPredicted RBP23.02■■□□□ 1.28
CPNE2-201ENST00000290776 PITPNM2Q9BZ72 1349 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 CALUO43852 315 aaPredicted RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 SHMT1P34896 483 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 GALCP54803 685 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 SPRED3Q2MJR0 410 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 GPATCH4Q5T3I0 446 aaKnown RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 SLC35C1Q96A29 364 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 P2RX7Q99572 595 aaKnown RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 PAGR1Q9BTK6 254 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 BHMT2Q9H2M3 363 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 CD248Q9HCU0 757 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 ASTN1O14525 1302 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 ATP2B4P23634 1241 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 PPP2R2AP63151 447 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 SETQ01105 290 aaPredicted RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 ACTN3Q08043 901 aaPredicted RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 IFFO1Q0D2I5 559 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 CCDC121Q6ZUS5 278 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 YTHDF3Q7Z739 585 aaKnown RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 JPH2Q9BR39 696 aaPredicted RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 VCPKMTQ9H867 229 aa23.01■■□□□ 1.27
CPNE2-201ENST00000290776 UTP11Q9Y3A2 253 aaKnown RBP23.01■■□□□ 1.27
CPNE2-201ENST00000290776 USH1GQ495M9 461 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 PRR5LQ6MZQ0 368 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 SLC30A10Q6XR72 485 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 C15orf52Q6ZUT6 534 aaKnown RBP23■■□□□ 1.27
CPNE2-201ENST00000290776 CCDC26Q8TAB7 109 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 LMBR1Q8WVP7 490 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 GOPCQ9HD26 462 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 SEPT11Q9NVA2 429 aaKnown RBP23■■□□□ 1.27
CPNE2-201ENST00000290776 CCDC188H7C350 402 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 TRAPPC3O43617 180 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 BUB1BO60566 1050 aaPredicted RBP23■■□□□ 1.27
CPNE2-201ENST00000290776 SPATA31C1P0DKV0 1188 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 PRKCIP41743 596 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 ARHGAP4P98171 946 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 SPIRE1Q08AE8 756 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 BIRC3Q13489 604 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 SWT1Q5T5J6 900 aaKnown RBP23■■□□□ 1.27
CPNE2-201ENST00000290776 MDM1Q8TC05 714 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 RUSC1Q9BVN2 902 aa23■■□□□ 1.27
CPNE2-201ENST00000290776 SUCLA2Q9P2R7 463 aaPredicted RBP23■■□□□ 1.27
CPNE2-201ENST00000290776 GOLGA6L7A0A1B0GV03 622 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 EVI5O60447 810 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 IBSPP21815 317 aaPredicted RBP22.99■■□□□ 1.27
CPNE2-201ENST00000290776 KSR1Q8IVT5 923 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 SLFN12Q8IYM2 578 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 LNX1Q8TBB1 728 aaPredicted RBP22.99■■□□□ 1.27
CPNE2-201ENST00000290776 TBC1D16Q8TBP0 767 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 USP40Q9NVE5 1235 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 PPP1R9AQ9ULJ8 1098 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 STXBP5LQ9Y2K9 1186 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 PHF20L1A8MW92 1017 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 JAM2P57087 298 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 ZNF211Q13398 564 aaPredicted RBP22.99■■□□□ 1.27
CPNE2-201ENST00000290776 MTMR3Q13615 1198 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 TRAPPC3LQ5T215 181 aa22.99■■□□□ 1.27
CPNE2-201ENST00000290776 EPM2AIP1Q7L775 607 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms