RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 PAGR1Q9BTK6 254 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 KCNMB3Q9NPA1 279 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 PCDHB13Q9Y5F0 798 aa18.6■□□□□ 0.57
SPG7-201ENST00000268704 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 FRMD3A2A2Y4 597 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 BTNL10A8MVZ5 291 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 POLD1P28340 1107 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 MAGOHP61326 146 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 EPHA7Q15375 998 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 KNOP1Q1ED39 458 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 SWT1Q5T5J6 900 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 LRIG3Q6UXM1 1119 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 TMC3Q7Z5M5 1100 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 CNBD1Q8NA66 436 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 MAGOHBQ96A72 148 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 LRRC45Q96CN5 670 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 JPH2Q9BR39 696 aaPredicted RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 MXD3Q9BW11 206 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 ATF5Q9Y2D1 282 aaPredicted RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 FLOT1O75955 427 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 DHX9Q08211 1270 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 SPATS2Q86XZ4 545 aaKnown RBP18.59■□□□□ 0.57
SPG7-201ENST00000268704 MDM1Q8TC05 714 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 VCPKMTQ9H867 229 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 YY1AP1Q9H869 796 aa18.59■□□□□ 0.57
SPG7-201ENST00000268704 IGSF9BQ9UPX0 1349 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 GMNCA6NCL1 334 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 FAM196BA6NMK8 535 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 CES2O00748 559 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 ABCB4P21439 1286 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 GTF2IP78347 998 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 ACTN3Q08043 901 aaPredicted RBP18.58■□□□□ 0.57
SPG7-201ENST00000268704 PRPF4BQ13523 1007 aaKnown RBP18.58■□□□□ 0.57
SPG7-201ENST00000268704 C6orf89Q6UWU4 347 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 NT5DC3Q86UY8 548 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 ANO3Q9BYT9 981 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 KIF13BQ9NQT8 1826 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 PLIN4Q96Q06 1357 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 ASTN1O14525 1302 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 GAKO14976 1311 aa18.58■□□□□ 0.57
SPG7-201ENST00000268704 FGGP02679 453 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 H2AFZP0C0S5 128 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 GCFC2P16383 781 aaKnown RBP18.58■□□□□ 0.56
SPG7-201ENST00000268704 QRICH1Q2TAL8 776 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 KRT71Q3SY84 523 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 PPP1R18Q6NYC8 613 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 H2AFVQ71UI9 128 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 C1orf131Q8NDD1 294 aaKnown RBP18.58■□□□□ 0.56
SPG7-201ENST00000268704 OSBPL7Q9BZF2 842 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 POLLQ9UGP5 575 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 ATP8A1Q9Y2Q0 1164 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 TRAPPC3O43617 180 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 CLSTN1O94985 981 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 IL1R1P14778 569 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 FRMD5Q7Z6J6 570 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 YTHDF3Q7Z739 585 aaKnown RBP18.58■□□□□ 0.56
SPG7-201ENST00000268704 GLYCTKQ8IVS8 523 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 LNX1Q8TBB1 728 aaPredicted RBP18.58■□□□□ 0.56
SPG7-201ENST00000268704 RAPGEF5Q92565 580 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 RPGRQ92834 1020 aaKnown RBP18.58■□□□□ 0.56
SPG7-201ENST00000268704 SLC35C1Q96A29 364 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 GGA1Q9UJY5 639 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
SPG7-201ENST00000268704 STXBP5LQ9Y2K9 1186 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 PCDHA1Q9Y5I3 950 aa18.58■□□□□ 0.56
SPG7-201ENST00000268704 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
SPG7-201ENST00000268704 NR3C1P04150 777 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 GALCP54803 685 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 PPP2R2AP63151 447 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 SPIRE1Q08AE8 756 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 DCAF12L1Q5VU92 463 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 KSR1Q8IVT5 923 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 ARFGAP2Q8N6H7 521 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 CALR3Q96L12 384 aaKnown RBP18.57■□□□□ 0.56
SPG7-201ENST00000268704 TRAF3IP3Q9Y228 551 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 BHMG1C9JSJ3 638 aaPredicted RBP18.57■□□□□ 0.56
SPG7-201ENST00000268704 BUB1BO60566 1050 aaPredicted RBP18.57■□□□□ 0.56
SPG7-201ENST00000268704 SPATA31C1P0DKV0 1188 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 SHMT1P34896 483 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 ZNF211Q13398 564 aaPredicted RBP18.57■□□□□ 0.56
SPG7-201ENST00000268704 IFI16Q16666 785 aaKnown RBP18.57■□□□□ 0.56
SPG7-201ENST00000268704 C10orf76Q5T2E6 689 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 PPP1R9AQ9ULJ8 1098 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 NENFQ9UMX5 172 aa18.57■□□□□ 0.56
SPG7-201ENST00000268704 DNM1LO00429 736 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 GCNT3O95395 438 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 JAM2P57087 298 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 RUSC1Q9BVN2 902 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 SERPINB13Q9UIV8 391 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 BZW2Q9Y6E2 419 aaKnown RBP18.56■□□□□ 0.56
SPG7-201ENST00000268704 EP400Q96L91 3159 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 PRKCIP41743 596 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 BYSLQ13895 437 aaKnown RBP18.56■□□□□ 0.56
SPG7-201ENST00000268704 CCDC121Q6ZUS5 278 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 SLFN11Q7Z7L1 901 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms