RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GPAA1O43292 621 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 GTPBP6O43824 516 aaPredicted RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 OR9Q1Q8NGQ5 310 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TESK2Q96S53 571 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 C10orf88Q9H8K7 445 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TPP2P29144 1249 aaPredicted RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 MRPS25P82663 173 aaKnown RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 CYP27A1Q02318 531 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 ANGPT1Q15389 498 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 ATXN3P54252 364 aaPredicted RBP11.88□□□□□ -0.51
MSH6-201ENST00000234420 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 PNMA5Q96PV4 448 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 SH3TC1Q8TE82 1336 aa11.88□□□□□ -0.51
MSH6-201ENST00000234420 PLS3P13797 630 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 CPB1P15086 417 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 CA4P22748 312 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 PLD3Q8IV08 490 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 DIAPH2O60879 1101 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 SERPINB2P05120 415 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 CACNB3P54284 484 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 POLR2FP61218 127 aaKnown RBP11.87□□□□□ -0.51
MSH6-201ENST00000234420 TFDP1Q14186 410 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 EXOC8Q8IYI6 725 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 ADNPQ9H2P0 1102 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 DNAJC17Q9NVM6 304 aaKnown RBP11.87□□□□□ -0.51
MSH6-201ENST00000234420 FANCLQ9NW38 375 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 PDE6CP51160 858 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 LAMB3Q13751 1172 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 MESDQ14696 234 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 HADHQ16836 314 aaKnown RBP11.87□□□□□ -0.51
MSH6-201ENST00000234420 IFT43Q96FT9 208 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 EDEM3Q9BZQ6 932 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 RPF1Q9H9Y2 349 aaKnown RBP11.87□□□□□ -0.51
MSH6-201ENST00000234420 EXOC1LA0A1B0GW35 172 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 HMBSP08397 361 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 GCFC2P16383 781 aaKnown RBP11.87□□□□□ -0.51
MSH6-201ENST00000234420 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 S100A5P33763 92 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 MECOMQ03112 1051 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 TMEM62Q0P6H9 643 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 PAN2Q504Q3 1202 aaKnown RBP11.87□□□□□ -0.51
MSH6-201ENST00000234420 SPOPLQ6IQ16 392 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 B4GALNT2Q8NHY0 566 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 TMEM60Q9H2L4 133 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 MRGBPQ9NV56 204 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 SERTAD1Q9UHV2 236 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 PJA2O43164 708 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 TRIM67Q6ZTA4 783 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 CRLF3Q8IUI8 442 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 KIAA1468Q9P260 1216 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 PCDHA12Q9UN75 941 aa11.87□□□□□ -0.51
MSH6-201ENST00000234420 NFIBO00712 420 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 KCNA3P22001 575 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
MSH6-201ENST00000234420 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CACNA2D2Q9NY47 1150 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 SENP1Q9P0U3 644 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 LRWD1Q9UFC0 647 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 MAPK9P45984 424 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 BTKQ06187 659 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 KLC1Q07866 573 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 TBL3Q12788 808 aaKnown RBP11.86□□□□□ -0.51
MSH6-201ENST00000234420 TTC38Q5R3I4 469 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 NAIF1Q69YI7 327 aaPredicted RBP11.86□□□□□ -0.51
MSH6-201ENST00000234420 SIX6OS1Q8N1H7 587 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 KCTD6Q8NC69 237 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 PDE5AO76074 875 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CHMLP26374 656 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 NME3Q13232 169 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 PCGF5Q86SE9 256 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 DTX3LQ8TDB6 740 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 RGL1Q9NZL6 768 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ATP5HO75947 161 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 MOCS3O95396 460 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CTSHP09668 335 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 TRIP13Q15645 432 aaPredicted RBP11.86□□□□□ -0.51
MSH6-201ENST00000234420 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 OR6B3Q8NGW1 331 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 TTC17Q96AE7 1141 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ZCCHC17Q9NP64 241 aaKnown RBP11.86□□□□□ -0.51
MSH6-201ENST00000234420 MAN1C1Q9NR34 630 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ADA2Q9NZK5 511 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 L3MBTL1Q9Y468 752 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CPP00450 1065 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 PLIN5Q00G26 463 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms