RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Krt80Q0VBK2 452 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Spc25Q3UA16 226 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Znf12Q7TSI0 686 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Scfd1Q8BRF7 639 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ccz1Q8C1Y8 480 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Sept10Q8C650 452 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Spire2Q8K1S6 718 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 P3h4Q8K2B0 443 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Plekha4Q8VC98 588 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ces1dQ8VCT4 565 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ppp1r16bQ8VHQ3 568 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Kcng1A2BDX4 514 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 MagohP61327 146 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Sparcl1P70663 650 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Upf3bQ3ULL6 472 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Gm10392Q3V3I3 114 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ckap2lQ7TS74 745 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Morc2bQ8C5W4 1022 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 PlvapQ91VC4 438 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 MagohbQ9CQL1 146 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 CoblQ5NBX1 1337 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Vmn2r23E9PXI5 849 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Aco1P28271 889 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Gbp10Q000W5 611 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Sec31aQ3UPL0 1230 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ccdc154Q6RUT8 657 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 TbckQ8BM85 762 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Suds3Q8BR65 328 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ttc38A3KMP2 465 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Gm5926E9PWJ8 236 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Wfs1P56695 890 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ccna1Q61456 421 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Sv2cQ69ZS6 727 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 TwistnbQ78WZ7 330 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Best2Q8BGM5 508 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Tmem134Q8R0J4 195 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Nde1Q9CZA6 344 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Tcp11x2A2AEI7 503 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Uhmk1P97343 419 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Atp11aP98197 1187 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ccdc138Q0VF22 680 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Llgl2Q3TJ91 1027 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Lrig2Q52KR2 1054 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Itih1Q61702 907 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Zfp341Q6PGC9 846 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Stx19Q8R1Q0 292 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ces1fQ91WU0 561 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Rrp1bQ91YK2 724 aaKnown RBP13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 CenpkQ9ESN5 271 aa13.7□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Pdzd8B9EJ80 1147 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Creb3Q61817 404 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ces5aQ6AW46 575 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Tlr3Q99MB1 905 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Rcan1Q9JHG6 198 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 SfnO70456 248 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Cav1P49817 178 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Znf148Q61624 794 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Tcp10aQ80W76 438 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Hpcal4Q8BGZ1 191 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Tasp1Q8R1G1 420 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Polr3eQ9CZT4 710 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 A630010A05RikA9C473 232 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ms4a2P20490 235 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 PpargP37238 505 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Lrch1P62046 709 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Kiaa0391Q8JZY4 584 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Pspc1Q8R326 523 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Q91WD4 421 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Snx2Q9CWK8 519 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Carmil3Q3UFQ8 1375 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Supt3B0QZW4 406 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Gm6588E9Q3K0 461 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 GfapP03995 430 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Pou5f1P20263 352 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 NficP70255 439 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 MlxipQ2VPU4 917 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ifnl2Q4VK74 193 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Usp8Q80U87 1080 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Snip1Q8BIZ6 383 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Srp68Q8BMA6 625 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Maged2Q9ER67 616 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Gm45261A0A1B0GSP6 197 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Mup5P11591 180 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Mcl1P97287 331 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Hsph1Q61699 858 aaKnown RBP13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Rnf168Q80XJ2 565 aa13.69□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Hipk4Q3V016 616 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Nlrp4fQ66X05 959 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Tbc1d22bQ80VE5 505 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Champ1Q8K327 802 aaKnown RBP13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Pold3Q9EQ28 462 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Cpb2Q9JHH6 422 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 LbrQ3U9G9 626 aaKnown RBP13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Carmil2Q3V3V9 1296 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ppp1r12bQ8BG95 976 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Afg3l1Q920A7 789 aaKnown RBP13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Arhgef7Q9ES28 862 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Atp10aO54827 1508 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Unc13aQ4KUS2 1712 aa13.68□□□□□ -0.22
Gm28043-201ENSMUST00000130871 Ipo11Q8K2V6 975 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms