RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Irs4Q9Z0Y7 1216 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Zscan18E9PUD6 809 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 AaasP58742 546 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Snai1Q02085 264 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Cyp26b1Q811W2 512 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Cc2d1bQ8BRN9 848 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Asic2Q925H0 512 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 4933428M09RikQ9D3X3 192 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Tlr2Q9QUN7 784 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ddx25Q9QY15 484 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Vmn2r79E9Q067 851 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Myo1eE9Q634 1107 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 CflarO35732 481 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rpusd2Q149F1 553 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ankrd13aQ80UP5 588 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rab11fip4Q8BQP8 635 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ccdc15Q8C9M2 810 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Dynll2Q9D0M5 89 aa18.33■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Inpp4aQ9EPW0 939 aa18.33■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Cyp2c23E9Q5K4 494 aa18.33■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Npy5rO70342 466 aa18.33■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Atp2a2O55143 1044 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Fam183bQ5NC57 135 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Swap70Q6A028 585 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Zswim5Q80TC6 1188 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Cadps2Q8BYR5 1297 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccdc80Q8R2G6 949 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Tex21Q9R0U9 575 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Kmt2eQ3UG20 1868 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gm6121L7MUF1 212 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 PawrQ925B0 333 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Stx17Q9D0I4 301 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gm5737A0A140LI11 423 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ano3A2AHL1 981 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Plk4Q64702 925 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Utp14bQ6EJB6 756 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 TwistnbQ78WZ7 330 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccdc50Q810U5 305 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Luc7lQ9CYI4 371 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 CoasyQ9DBL7 563 aa18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Pacsin2Q9WVE8 486 aaKnown RBP18.32■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Plekhg2Q6KAU7 1340 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 RptorQ8K4Q0 1335 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 MipepA6H611 711 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 UncxO08934 530 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Mapkapk5O54992 473 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 AdkP55264 361 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Fgd5Q80UZ0 1219 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Man2a2Q8BRK9 1152 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 RtcbQ99LF4 505 aaKnown RBP18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Krt34Q9D646 392 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Tfap4Q9JIZ5 338 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ttc38A3KMP2 465 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Dctn1O08788 1281 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 SpertQ32MG2 446 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Trim80Q3V061 624 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Esco1Q69Z69 843 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Nlrp14Q6B966 993 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Trpa1Q8BLA8 1125 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Akap8Q9DBR0 687 aaKnown RBP18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Fam155bA2BDP1 471 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Zfp408H7BX78 710 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Casp1P29452 402 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gna15P30678 374 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 VeztQ3ZK22 780 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 StilQ60988 1262 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 FsbpQ8BKE5 299 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Plcb4Q91UZ1 1175 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Armc9Q9D2I5 817 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Sgf29Q9DA08 293 aaKnown RBP18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Uts2Q9QZQ3 123 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Vav3Q9R0C8 847 aa18.31■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ugt1a2P70691 533 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Mdh1bQ5F204 500 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Vil1Q62468 827 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ubap1Q8BH48 502 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Csgalnact2Q8C1F4 542 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Inpp5fQ8CDA1 1132 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 OtoaQ8K561 1137 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Pex5O09012 639 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Orc2Q60862 576 aaKnown RBP18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccpg1Q640L3 753 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Q8BGD0 127 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Sugp1Q8CH02 643 aaKnown RBP18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Sertad1Q9JL10 236 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Akr1b8P45377 316 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Cops2P61202 443 aaKnown RBP18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gdf10P97737 476 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Nlrp4cQ3TKR3 982 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Tbc1d1Q60949 1255 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Lrig3Q6P1C6 1117 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ttc16Q8C1F5 767 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Krt79Q8VED5 531 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccdc89Q9DA73 370 aa18.3■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Rsbn1lD3Z0K6 821 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Q80WR5 230 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gcfc2Q8BKT3 769 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Adamtsl1Q8BLI0 1745 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Nup62clA2AG10 272 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Dnaaf5B9EJR8 853 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms