RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 LAMC2Q13753 1193 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 Q4G0T1 1027 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 NAALADL2Q58DX5 795 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 SPATA1Q5VX52 437 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 METTL7BQ6UX53 244 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 SEPT14Q6ZU15 432 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 MTMR9Q96QG7 549 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 MED15Q96RN5 788 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 NFE2L3Q9Y4A8 694 aa11.45□□□□□ -0.58
PHGDH-224ENST00000641711 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
PHGDH-224ENST00000641711 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 A6NJR5 290 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 SERPINC1P01008 464 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-224ENST00000641711 UBA7P41226 1012 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 STAT6P42226 847 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 KCNB1Q14721 858 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 LRRC41Q15345 812 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 LETM2Q2VYF4 491 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 CELF3Q5SZQ8 465 aaKnown RBP11.44□□□□□ -0.58
PHGDH-224ENST00000641711 RRAGBQ5VZM2 374 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 TMC6Q7Z403 805 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 C17orf53Q8N3J3 647 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-224ENST00000641711 OR6J1Q8NGC5 347 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 PPTC7Q8NI37 304 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 PRIMPOLQ96LW4 560 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 GTPBP4Q9BZE4 634 aaKnown RBP11.44□□□□□ -0.58
PHGDH-224ENST00000641711 PDGFCQ9NRA1 345 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 KCNH7Q9NS40 1196 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 TBC1D22BQ9NU19 505 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 KBTBD4Q9NVX7 518 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 TCEAL9Q9UHQ7 104 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 PDE4DIPQ5VU43 2346 aa11.44□□□□□ -0.58
PHGDH-224ENST00000641711 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 FAM86B1E9PN63 330 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 ADCY6O43306 1168 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 EDIL3O43854 480 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 CCNT1O60563 726 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 FARP2O94887 1054 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 ARIH2O95376 493 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 GGPS1O95749 300 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 TFRCP02786 760 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 FAM86B2P0C5J1 330 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 C6orf222P0C671 652 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 SKILP12757 684 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 CD44P16070 742 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 KCNA2P16389 499 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.584e-8■■■□□ 17.3
PHGDH-224ENST00000641711 ARHGAP1Q07960 439 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 KARSQ15046 597 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 ZNF658Q5TYW1 1059 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 CDKAL1Q5VV42 579 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 DHX37Q8IY37 1157 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 IGSF22Q8N9C0 903 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 RIT2Q99578 217 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 PHF24Q9UPV7 400 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
PHGDH-224ENST00000641711 CENPFP49454 3210 aa11.43□□□□□ -0.58
PHGDH-224ENST00000641711 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 DYNC1LI2O43237 492 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 RPN1P04843 607 aaKnown RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 CASP1P29466 404 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 KRT76Q01546 638 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 TBX2Q13207 712 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 PDIA5Q14554 519 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 PRR16Q569H4 304 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 CCSAPQ6IQ19 270 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 NECAB2Q7Z6G3 386 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 UBE2Q1Q7Z7E8 422 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 CABP7Q86V35 215 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 CCDC112Q8NEF3 446 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 RDM1Q8NG50 284 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 LENG9Q96B70 501 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 FAM20AQ96MK3 541 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 MLXIPQ9HAP2 919 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 AGO4Q9HCK5 861 aaKnown RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 JPH1Q9HDC5 661 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 DDX25Q9UHL0 483 aaKnown RBP11.42□□□□□ -0.58
PHGDH-224ENST00000641711 RWDD2AQ9UIY3 292 aa11.42□□□□□ -0.58
PHGDH-224ENST00000641711 A0A1B0GTH6 734 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 IPO5O00410 1097 aaKnown RBP11.41□□□□□ -0.58
PHGDH-224ENST00000641711 NOP56O00567 594 aaKnown RBP11.41□□□□□ -0.58
PHGDH-224ENST00000641711 SLC26A4O43511 780 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 NRDCO43847 1150 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 PGK1P00558 417 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 MYCP01106 439 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-224ENST00000641711 MMP3P08254 477 aa11.41□□□□□ -0.58
PHGDH-224ENST00000641711 COL6A1P12109 1028 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms