RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 UBA5Q9GZZ9 404 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 DUSP12Q9UNI6 340 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 HCFC2Q9Y5Z7 792 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 RPLP2P05387 115 aaKnown RBP12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 LAG3P18627 525 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 CCND2P30279 289 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 CA8P35219 290 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 MRPS6P82932 125 aaKnown RBP12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 PAK2Q13177 524 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 COL9A3Q14050 684 aaPredicted RBP12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 NEDD9Q14511 834 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 OTOP3Q7RTS5 596 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 VSIG10LQ86VR7 867 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 C1orf210Q8IVY1 113 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 TYW1Q9NV66 732 aaKnown RBP12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 TUBE1Q9UJT0 475 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 PADI3Q9ULW8 664 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 OTOGLQ3ZCN5 2332 aa12.79□□□□□ -0.36
PTP4A1-207ENST00000639568 ORC4O43929 436 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 CFHP08603 1231 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 RLBP1P12271 317 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 SARSP49591 514 aaKnown RBP12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 PPFIA1Q13136 1202 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 GNPTABQ3T906 1256 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 METTL7BQ6UX53 244 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 CYFIP1Q7L576 1253 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 BORCS6Q96GS4 357 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 GPATCH3Q96I76 525 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 TTC14Q96N46 770 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 GPR20Q99678 358 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 CPVLQ9H3G5 476 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 KCNK12Q9HB15 430 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 TCP11L1Q9NUJ3 509 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 WNT16Q9UBV4 365 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 SQORQ9Y6N5 450 aa12.78□□□□□ -0.36
PTP4A1-207ENST00000639568 SNHG28P0DPA3 235 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 SP4Q02446 784 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 PGM5Q15124 567 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 NONOQ15233 471 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 ADGRF4Q8IZF3 695 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 C12orf76Q8N812 135 aaPredicted RBP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 MRPL43Q8N983 215 aaKnown RBP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 GPKOWQ92917 476 aaPredicted RBP eCLIP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 FAM49AQ9H0Q0 323 aaPredicted RBP12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 BCAS3Q9H6U6 928 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 TBC1D17Q9HA65 648 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 USP18Q9UMW8 372 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 SIT1Q9Y3P8 196 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 PCDHA1Q9Y5I3 950 aa12.77□□□□□ -0.37
PTP4A1-207ENST00000639568 DENND3A2RUS2 1198 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 DCNP07585 359 aaKnown RBP12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 PPM1AP35813 382 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 HSD17B4P51659 736 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 GRIK4Q16099 956 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 QRICH1Q2TAL8 776 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 CCDC149Q6ZUS6 474 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 STOX1Q6ZVD7 989 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 MAP3K20Q9NYL2 800 aaKnown RBP12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 IGSF9Q9P2J2 1179 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 ANAPC4Q9UJX5 808 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 TTC3P53804 2025 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 FAM208BQ5VWN6 2430 aa12.76□□□□□ -0.37
PTP4A1-207ENST00000639568 SPTLC1O15269 473 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 CLASP2O75122 1294 aaKnown RBP12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 HOXA13P31271 388 aaPredicted RBP12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 IGBP1P78318 339 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 FAM102BQ5T8I3 360 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 ATRIPQ8WXE1 791 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 CA14Q9ULX7 337 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 TRPV2Q9Y5S1 764 aa12.75□□□□□ -0.37
PTP4A1-207ENST00000639568 KRBA1A5PL33 1030 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 C2orf71A6NGG8 1288 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 NARSO43776 548 aaKnown RBP12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 MARK3P27448 753 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 PDE4AP27815 886 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 TMEM62Q0P6H9 643 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 KANK3Q6NY19 840 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 KCNT2Q6UVM3 1135 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 TMC5Q6UXY8 1006 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 FAM43BQ6ZT52 329 aaPredicted RBP12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 SLC24A5Q71RS6 500 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 CABP7Q86V35 215 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 IL31RAQ8NI17 732 aa12.74□□□□□ -0.37
PTP4A1-207ENST00000639568 ZNF558Q96NG5 402 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms