RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 NONOQ15233 471 aaKnown RBP eCLIP7.34□□□□□ -1.23
RTTN-215ENST00000639487 ENGASEQ8NFI3 743 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 ZKSCAN4Q969J2 545 aaPredicted RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 HERC2P3Q9BVR0 1158 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 SLKQ9H2G2 1235 aaPredicted RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 FZD8Q9H461 694 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 ARHGAP28Q9P2N2 729 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 LCMT1Q9UIC8 334 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 PCDHA11Q9Y5I1 949 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 LRP4O75096 1905 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 TTC36A6NLP5 189 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 B4E1Z4 1266 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 HOXA2O43364 376 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 SLC12A3P55017 1021 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 GTF2BQ00403 316 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 SPP2Q13103 211 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 UBR7Q8N806 425 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 TRIM34Q9BYJ4 488 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 MTMR6Q9Y217 621 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 ATP6V1DQ9Y5K8 247 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 ZNF638Q14966 1978 aaKnown RBP7.33□□□□□ -1.24
RTTN-215ENST00000639487 WDR64B1ANS9 1081 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 IFIT3O14879 490 aaKnown RBP7.33□□□□□ -1.24
RTTN-215ENST00000639487 LRPAP1P30533 357 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 CRYBB1P53674 252 aaPredicted RBP7.33□□□□□ -1.24
RTTN-215ENST00000639487 LRRC41Q15345 812 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 AMHR2Q16671 573 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 Q3C1V9 767 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 SYNE3Q6ZMZ3 975 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 ANKRD35Q8N283 1001 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 MCOLN1Q9GZU1 580 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
RTTN-215ENST00000639487 HMX1Q9NP08 348 aaPredicted RBP7.33□□□□□ -1.24
RTTN-215ENST00000639487 IL37Q9NZH6 218 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 ABCF2Q9UG63 623 aa7.33□□□□□ -1.24
RTTN-215ENST00000639487 TBC1D4O60343 1298 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 SLC34A2O95436 690 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 PRR29P0C7W0 189 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 CCL5P13501 91 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 TOB1P50616 345 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 DCAF4L1Q3SXM0 396 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 XKR3Q5GH77 459 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 PRPF38BQ5VTL8 546 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 SNX30Q5VWJ9 437 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 IER5Q5VY09 327 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 KIFAP3Q92845 792 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 RXFP1Q9HBX9 757 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 BRMS1Q9HCU9 246 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 TP53BP1Q12888 1972 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 TRIP12Q14669 1992 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 GOLGA8AA7E2F4 631 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 GOLGA8BA8MQT2 603 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 ZC3H11AO75152 810 aaKnown RBP eCLIP7.32□□□□□ -1.24
RTTN-215ENST00000639487 ZNF189O75820 626 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 P4HBP07237 508 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 CMA1P23946 247 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 NAMPTP43490 491 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 HMGCS2P54868 508 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 DHX8Q14562 1220 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 ZBTB6Q15916 424 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 DGKDQ16760 1214 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 MUM1L1Q5H9M0 696 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 MIS18BP1Q6P0N0 1132 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 PDXDC2PQ6P474 469 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 ZNF662Q6ZS27 426 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 TSHZ1Q6ZSZ6 1077 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 RAVER1Q8IY67 606 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 REXO1Q8N1G1 1221 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 CLIP2Q9UDT6 1046 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 SEC63Q9UGP8 760 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 PSAPP07602 524 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 GARTP22102 1010 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 PSMC5P62195 406 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 ARHGAP4P98171 946 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 PPIGQ13427 754 aaKnown RBP eCLIP7.32□□□□□ -1.24
RTTN-215ENST00000639487 MXD4Q14582 209 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 KCTD2Q14681 263 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 CBX2Q14781 532 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 MFSD5Q6N075 450 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 TYW1BQ6NUM6 668 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 PPP1R2P3Q6NXS1 205 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 C15orf39Q6ZRI6 1047 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 APBB1IPQ7Z5R6 666 aaPredicted RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 VSIG1Q86XK7 387 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 TMX3Q96JJ7 454 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 EFCC1Q9HA90 598 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 IL23AQ9NPF7 189 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 DDX25Q9UHL0 483 aaKnown RBP7.32□□□□□ -1.24
RTTN-215ENST00000639487 TRAF3IP3Q9Y228 551 aa7.32□□□□□ -1.24
RTTN-215ENST00000639487 CLRN2A0PK11 232 aa7.31□□□□□ -1.24
RTTN-215ENST00000639487 LILRB3O75022 631 aa7.31□□□□□ -1.24
RTTN-215ENST00000639487 PAPSS2O95340 614 aaPredicted RBP7.31□□□□□ -1.24
RTTN-215ENST00000639487 UBA1P22314 1058 aaKnown RBP7.31□□□□□ -1.24
RTTN-215ENST00000639487 EFNA5P52803 228 aa7.31□□□□□ -1.24
RTTN-215ENST00000639487 NAB2Q15742 525 aa7.31□□□□□ -1.24
RTTN-215ENST00000639487 EDRF1Q3B7T1 1238 aa7.31□□□□□ -1.24
RTTN-215ENST00000639487 ZCWPW2Q504Y3 356 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms