RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ADORA2BP29275 332 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 KLC3Q6P597 504 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 RNPEPQ9H4A4 650 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 HYOU1Q9Y4L1 999 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 CACNB3P54284 484 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 NLRP11P59045 1033 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 TWF2Q6IBS0 349 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 NUP93Q8N1F7 819 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 PHF21AQ96BD5 680 aa17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 CHCHD3Q9NX63 227 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 SCAF8Q9UPN6 1271 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-238ENST00000637276 COPB2P35606 906 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 SLFN13Q68D06 897 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 INTS9Q9NV88 658 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 LRRD1A4D1F6 860 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 SH3BP5LQ7L8J4 393 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 CCNYL1Q8N7R7 359 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 TMEM63CQ9P1W3 806 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 ARMCX3Q9UH62 379 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 GUCA1CO95843 209 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 ITPRIPL1Q6GPH6 555 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 PKN3Q6P5Z2 889 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 SELENONQ9NZV5 590 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 MT-ND3P03897 115 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 LCP1P13796 627 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 VPS11Q9H270 941 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 FOSP01100 380 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 RPF1Q9H9Y2 349 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 FGFR1OP2Q9NVK5 253 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
CACNA1A-238ENST00000637276 ARHGAP10A1A4S6 786 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 KRT87PA6NCN2 255 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 MYO1GB0I1T2 1018 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 KLRF2D3W0D1 207 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 ANKRD65E5RJM6 399 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 CHEK2O96017 543 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 SGO1Q5FBB7 561 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 EXOC3L4Q17RC7 722 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 KDM3AQ9Y4C1 1321 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 PKP1Q13835 747 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 DEPDC1Q5TB30 811 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 KLHL8Q9P2G9 620 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 PRR23D1E9PI22 279 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 MYO1FO00160 1098 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 MEFVO15553 781 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 TSC22D2O75157 780 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 PRR23D2P0DMB1 279 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 DNAJC24Q6P3W2 148 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 TRIM58Q8NG06 486 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 CPB1P15086 417 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 CHSY1Q86X52 802 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 SPATS2Q86XZ4 545 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 EIF2AQ9BY44 585 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 TYW1Q9NV66 732 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 TUBBP07437 444 aa17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 EIF2AK2P19525 551 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 DDX42Q86XP3 938 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-238ENST00000637276 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 COPRSQ9NQ92 184 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 DONSONQ9NYP3 566 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 SOAT1P35610 550 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 PLIN5Q00G26 463 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 HS6ST3Q8IZP7 471 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 INPP5DQ92835 1189 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 SCINQ9Y6U3 715 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 GNA14O95837 355 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 KIZQ2M2Z5 673 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 LEMD2Q8NC56 503 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 CNOT6LQ96LI5 555 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 ZBTB18Q99592 522 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 ALG13Q9NP73 1137 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 MFAP3P55082 362 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 TMEM62Q0P6H9 643 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 TOMM20Q15388 145 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 EFCAB13Q8IY85 973 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 MIER2Q8N344 545 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 KHDRBS2Q5VWX1 349 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 DCAF15Q66K64 600 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 LMBRD1Q9NUN5 540 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 AK9Q5TCS8 1911 aa17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 HSPA1AP0DMV8 641 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-238ENST00000637276 HSPA1BP0DMV9 641 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms