RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NPY5RQ15761 445 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 FBXO47Q5MNV8 452 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 PDXDC2PQ6P474 469 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 MTHFD1LQ6UB35 978 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 ATP8B4Q8TF62 1192 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 GDPD5Q8WTR4 605 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 TNPO1Q92973 898 aaKnown RBP19.47■□□□□ 0.71
HMGN3-203ENST00000620514 TOP1MTQ969P6 601 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 TBC1D22BQ9NU19 505 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 TPCN1Q9ULQ1 816 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 PCDHA4Q9UN74 947 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 INSL6Q9Y581 213 aa19.47■□□□□ 0.71
HMGN3-203ENST00000620514 PRRC2BQ5JSZ5 2229 aaKnown RBP19.47■□□□□ 0.71
HMGN3-203ENST00000620514 COL4A4P53420 1690 aaPredicted RBP19.46■□□□□ 0.71
HMGN3-203ENST00000620514 GTPBP6O43824 516 aaPredicted RBP19.46■□□□□ 0.71
HMGN3-203ENST00000620514 SLC26A2P50443 739 aa19.46■□□□□ 0.71
HMGN3-203ENST00000620514 ERVK-21P61565 698 aa19.46■□□□□ 0.71
HMGN3-203ENST00000620514 ZNF746Q6NUN9 644 aaPredicted RBP19.46■□□□□ 0.71
HMGN3-203ENST00000620514 CPLX2Q6PUV4 134 aaKnown RBP19.46■□□□□ 0.71
HMGN3-203ENST00000620514 TBCKQ8TEA7 893 aa19.46■□□□□ 0.71
HMGN3-203ENST00000620514 TGS1Q96RS0 853 aaKnown RBP19.46■□□□□ 0.71
HMGN3-203ENST00000620514 AGO3Q9H9G7 860 aaKnown RBP19.46■□□□□ 0.71
HMGN3-203ENST00000620514 TRPV2Q9Y5S1 764 aa19.46■□□□□ 0.71
HMGN3-203ENST00000620514 M0R2N6 131 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 MSH4O15457 936 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 HBP1O60381 514 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 KLRC1P26715 233 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 KRT76Q01546 638 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 TSHZ1Q6ZSZ6 1077 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 TRMT1LQ7Z2T5 733 aaKnown RBP19.45■□□□□ 0.7
HMGN3-203ENST00000620514 BLIDQ8IZY5 108 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 SP7Q8TDD2 431 aaPredicted RBP19.45■□□□□ 0.7
HMGN3-203ENST00000620514 GJA10Q969M2 543 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 C17orf80Q9BSJ5 609 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 SLKQ9H2G2 1235 aaPredicted RBP19.45■□□□□ 0.7
HMGN3-203ENST00000620514 SUGCTQ9HAC7 445 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 THEGQ9P2T0 379 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 KCNJ14Q9UNX9 436 aa19.45■□□□□ 0.7
HMGN3-203ENST00000620514 SMIM35A0A1B0GVV1 85 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 ZBTB42B2RXF5 422 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 PFKFB2O60825 505 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 CD52P31358 61 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 USP11P51784 963 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 AK2P54819 239 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 ANAPC15P60006 121 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 IER5Q5VY09 327 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 SMAP1Q8IYB5 467 aaPredicted RBP19.44■□□□□ 0.7
HMGN3-203ENST00000620514 DAGLBQ8NCG7 672 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 YME1L1Q96TA2 773 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 GABBR1Q9UBS5 961 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 PCDHA10Q9Y5I2 948 aa19.44■□□□□ 0.7
HMGN3-203ENST00000620514 MAFBQ9Y5Q3 323 aaPredicted RBP19.44■□□□□ 0.7
HMGN3-203ENST00000620514 ENPP3O14638 875 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 TDP2O95551 362 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 CENPBP07199 599 aaPredicted RBP19.43■□□□□ 0.7
HMGN3-203ENST00000620514 PSAPP07602 524 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 TJAP1Q5JTD0 557 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 ZNF484Q5JVG2 852 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 CKAP2LQ8IYA6 745 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 LINC01599Q8WXQ3 324 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 SLC5A5Q92911 643 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 CELF4Q9BZC1 486 aaKnown RBP19.43■□□□□ 0.7
HMGN3-203ENST00000620514 GJB4Q9NTQ9 266 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 TCEAL9Q9UHQ7 104 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 SAMM50Q9Y512 469 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 TRANK1O15050 2925 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 COL1A2P08123 1366 aa19.43■□□□□ 0.7
HMGN3-203ENST00000620514 M0QZ92 97 aa19.42■□□□□ 0.7
HMGN3-203ENST00000620514 CTDNEP1O95476 244 aa19.42■□□□□ 0.7
HMGN3-203ENST00000620514 SEC24BO95487 1268 aa19.42■□□□□ 0.7
HMGN3-203ENST00000620514 RPLP2P05387 115 aaKnown RBP19.42■□□□□ 0.7
HMGN3-203ENST00000620514 SKIV2LQ15477 1246 aaKnown RBP19.42■□□□□ 0.7
HMGN3-203ENST00000620514 KIAA0319LQ8IZA0 1049 aa19.42■□□□□ 0.7
HMGN3-203ENST00000620514 ATXN2LQ8WWM7 1075 aaKnown RBP19.42■□□□□ 0.7
HMGN3-203ENST00000620514 BBXQ8WY36 941 aaPredicted RBP19.42■□□□□ 0.7
HMGN3-203ENST00000620514 C22orf23Q9BZE7 217 aa19.42■□□□□ 0.7
HMGN3-203ENST00000620514 WDR64B1ANS9 1081 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 CHMP2AO43633 222 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 GAS7O60861 476 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 CDKL5O76039 1030 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 LARGE1O95461 756 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 C22orf31O95567 290 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 Q4G0T1 1027 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 RTN4RL1Q86UN2 441 aaPredicted RBP19.41■□□□□ 0.7
HMGN3-203ENST00000620514 NME8Q8N427 588 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 FBXO22Q8NEZ5 403 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 IL17RAQ96F46 866 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 ASB2Q96Q27 587 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 RIT2Q99578 217 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 PHF20Q9BVI0 1012 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 UNC45AQ9H3U1 944 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 CDHR5Q9HBB8 845 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 DISC1Q9NRI5 854 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 PADI3Q9ULW8 664 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 GINS2Q9Y248 185 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 SQORQ9Y6N5 450 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 IGSF9BQ9UPX0 1349 aa19.41■□□□□ 0.7
HMGN3-203ENST00000620514 CYP3A7-CYP3A51PA0A087WV96 503 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 ZNF862O60290 1169 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 CYP3A7P24462 503 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms