RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 SAPCD2Q86UD0 394 aa5.54□□□□□ -1.52
LINC00343-210ENST00000608220 DCP2Q8IU60 420 aaKnown RBP5.54□□□□□ -1.52
LINC00343-210ENST00000608220 PLEKHO2Q8TD55 490 aa5.54□□□□□ -1.52
LINC00343-210ENST00000608220 FRS2Q8WU20 508 aa5.54□□□□□ -1.52
LINC00343-210ENST00000608220 AP5M1Q9H0R1 490 aa5.54□□□□□ -1.52
LINC00343-210ENST00000608220 CPSF1Q10570 1443 aaKnown RBP5.54□□□□□ -1.52
LINC00343-210ENST00000608220 CCDC7Q96M83 1385 aa5.54□□□□□ -1.52
LINC00343-210ENST00000608220 PIK3C2AO00443 1686 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 FAM208AQ9UK61 1670 aaKnown RBP5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CENPJQ9HC77 1338 aaPredicted RBP5.53□□□□□ -1.52
LINC00343-210ENST00000608220 TBX1O43435 398 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 SUSD5O60279 629 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 GCP02774 474 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CELA3BP08861 270 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 TCF3P15923 654 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 ETFBP38117 255 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 RPL11P62913 178 aaKnown RBP5.53□□□□□ -1.52
LINC00343-210ENST00000608220 HTRA3P83110 453 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
LINC00343-210ENST00000608220 DDB1Q16531 1140 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 FXNQ16595 210 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 NT5DC1Q5TFE4 455 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 IQCEQ6IPM2 695 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 FRMD5Q7Z6J6 570 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CXorf38Q8TB03 319 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CPA5Q8WXQ8 436 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 DIO2Q92813 273 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 ZBTB8AQ96BR9 441 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 DDX11Q96FC9 970 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 TEPSINQ96N21 525 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 NOX5Q96PH1 765 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CDK19Q9BWU1 502 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 USP35Q9P2H5 1018 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 PRKAG3Q9UGI9 489 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 R3HCC1Q9Y3T6 440 aaKnown RBP5.53□□□□□ -1.52
LINC00343-210ENST00000608220 TIMM13Q9Y5L4 95 aaPredicted RBP5.53□□□□□ -1.52
LINC00343-210ENST00000608220 QSER1Q2KHR3 1735 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 MAP3K5Q99683 1374 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 MYOM1P52179 1685 aa5.53□□□□□ -1.52
LINC00343-210ENST00000608220 CHD4Q14839 1912 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 WDR17Q8IZU2 1322 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 TTC21AQ8NDW8 1320 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 MEFVO15553 781 aaPredicted RBP5.52□□□□□ -1.53
LINC00343-210ENST00000608220 MYO1BO43795 1136 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 CYP2C8P10632 490 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 FPR2P25090 351 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 HOXC12P31275 282 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 SMAD4Q13485 552 aaKnown RBP5.52□□□□□ -1.53
LINC00343-210ENST00000608220 TTLL7Q6ZT98 887 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 CEP68Q76N32 757 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 ZNF227Q86WZ6 799 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 KCNH5Q8NCM2 988 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 NPLOC4Q8TAT6 608 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 TRMT2BQ96GJ1 504 aaKnown RBP5.52□□□□□ -1.53
LINC00343-210ENST00000608220 CHAMP1Q96JM3 812 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 COL18A1P39060 1754 aa5.52□□□□□ -1.53
LINC00343-210ENST00000608220 MON2Q7Z3U7 1717 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 SMARCA5O60264 1052 aaPredicted RBP5.51□□□□□ -1.53
LINC00343-210ENST00000608220 HMGB2P26583 209 aaKnown RBP5.51□□□□□ -1.53
LINC00343-210ENST00000608220 BCL6P41182 706 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 ARID5AQ03989 594 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 PRSS53Q2L4Q9 553 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 UBXN11Q5T124 520 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 CD300LDQ6UXZ3 194 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 ETV3LQ6ZN32 361 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 TOM1L2Q6ZVM7 507 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 MILR1Q7Z6M3 343 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 CARFQ8N187 725 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 MICAL1Q8TDZ2 1067 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 SEC14L1Q92503 715 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 BDH2Q9BUT1 245 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 STK32BQ9NY57 414 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 NTMQ9P121 344 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 TMEFF2Q9UIK5 374 aaPredicted RBP5.51□□□□□ -1.53
LINC00343-210ENST00000608220 PAPPAQ13219 1627 aa5.51□□□□□ -1.53
LINC00343-210ENST00000608220 EVC2Q86UK5 1308 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 NFAT5O94916 1531 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 SH3D21A4FU49 640 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 AGRPO00253 132 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 SGSM2O43147 1006 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 CPP00450 1065 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 C8BP07358 591 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 DNAJA1P31689 397 aaKnown RBP5.5□□□□□ -1.53
LINC00343-210ENST00000608220 SARSP49591 514 aaKnown RBP5.5□□□□□ -1.53
LINC00343-210ENST00000608220 PLP2Q04941 152 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 CYP4F3Q08477 520 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 KCNAB2Q13303 367 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 SF1Q15637 639 aaKnown RBP5.5□□□□□ -1.53
LINC00343-210ENST00000608220 E4F1Q66K89 784 aaPredicted RBP5.5□□□□□ -1.53
LINC00343-210ENST00000608220 FERMT3Q86UX7 667 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 PPIL6Q8IXY8 311 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 FAM26EQ8N5C1 309 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 DDX1Q92499 740 aaKnown RBP5.5□□□□□ -1.53
LINC00343-210ENST00000608220 TMEM169Q96HH4 297 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 YIPF4Q9BSR8 244 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 MTFR1LQ9H019 292 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 ZNF408Q9H9D4 720 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 PALD1Q9ULE6 856 aa5.5□□□□□ -1.53
LINC00343-210ENST00000608220 COA3Q9Y2R0 106 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms