RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 LMNB2Q03252 620 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 SMC1AQ14683 1233 aaKnown RBP6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TNIP1Q15025 636 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 ARMC3Q5W041 872 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 NXNQ6DKJ4 435 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 RCSD1Q6JBY9 416 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 ATF7IPQ6VMQ6 1270 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TMPRSS7Q7RTY8 843 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 CDH24Q86UP0 819 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 SLC7A5P1Q8MH63 180 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 B4GALNT2Q8NHY0 566 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 KIF1BPQ96EK5 621 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 DDX11Q96FC9 970 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 C8orf76Q96K31 380 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 DIRC2Q96SL1 478 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 SRRTQ9BXP5 876 aaKnown RBP6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 PANK3Q9H999 370 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 BATF3Q9NR55 127 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 SLAMF8Q9P0V8 285 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 CFDP1Q9UEE9 299 aaPredicted RBP6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 FAM184BQ9ULE4 1060 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TTF2Q9UNY4 1162 aaKnown RBP6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TMED5Q9Y3A6 229 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 MRPL11Q9Y3B7 192 aaKnown RBP6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 PCDHB5Q9Y5E4 795 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 TMEM94Q12767 1356 aa6.53□□□□□ -1.36
LSM1P2-201ENST00000604911 A0A0B4J203 849 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 GOLGA6L9A6NEM1 432 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 STXBP3O00186 592 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 NFIBO00712 420 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 KIF3BO15066 747 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 ZNF189O75820 626 aaPredicted RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 STAMBPO95630 424 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 KCNA6P17658 529 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 HSPA4P34932 840 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 CCNHP51946 323 aaPredicted RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 KIF11P52732 1056 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 UBASH3AP57075 661 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 DDR1Q08345 913 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 DDX10Q13206 875 aaKnown RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 SEPT6Q14141 434 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 TMEM95Q3KNT9 176 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 LRRC23Q53EV4 343 aaPredicted RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 C10orf76Q5T2E6 689 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 LMBRD2Q68DH5 695 aaPredicted RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 FIP1L1Q6UN15 594 aaKnown RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 HDGFL2Q7Z4V5 671 aaPredicted RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 ARHGAP22Q7Z5H3 698 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 RPAP2Q8IXW5 612 aaPredicted RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 TRIM58Q8NG06 486 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 ABHD4Q8TB40 342 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 KIAA1524Q8TCG1 905 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 ARHGAP45Q92619 1136 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 PPP1R14BQ96C90 147 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 SAAL1Q96ER3 474 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 CFAP36Q96G28 342 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 SLC39A13Q96H72 371 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 MAML3Q96JK9 1138 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 CCDC114Q96M63 670 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 Q96M66 194 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 ZMAT2Q96NC0 199 aaKnown RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 KCNK12Q9HB15 430 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 SP110Q9HB58 689 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 DDX25Q9UHL0 483 aaKnown RBP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 MCM8Q9UJA3 840 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 TMEM59LQ9UK28 342 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 TRAF3IP3Q9Y228 551 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 PRELID1Q9Y255 219 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 CARD8Q9Y2G2 431 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
LSM1P2-201ENST00000604911 KIF2AO00139 706 aaPredicted RBP6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 ABLIM1O14639 778 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 SPTLC2O15270 562 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 AHCYL1O43865 530 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 KPNA6O60684 536 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 BAIAP3O94812 1187 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 HPXP02790 462 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 GYS1P13807 737 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 ATF7P17544 494 aaPredicted RBP6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 MCM3P25205 808 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 HSD3B2P26439 372 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 HSPA1LP34931 641 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 GCKP35557 465 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 GNL1P36915 607 aaPredicted RBP6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 PEX5P50542 639 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 CORO7P57737 925 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 ERVFC1P60507 584 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 COG2Q14746 738 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 BRD3Q15059 726 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 GAB4Q2WGN9 574 aa6.51□□□□□ -1.37
LSM1P2-201ENST00000604911 Q4G0T1 1027 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms