RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 PRKCEQ02156 737 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 FPGSQ05932 587 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 PTGDRQ13258 359 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 NBR1Q14596 966 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 TMEM266Q2M3C6 531 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 C4orf32Q8N8J7 132 aa15.52■□□□□ 0.08
SNRPA-208ENST00000600456 DHX38Q92620 1227 aaKnown RBP15.52■□□□□ 0.08
SNRPA-208ENST00000600456 ZSCAN16Q9H4T2 348 aaPredicted RBP15.52■□□□□ 0.08
SNRPA-208ENST00000600456 LTBP2Q14767 1821 aa15.52■□□□□ 0.07
SNRPA-208ENST00000600456 ZNF862O60290 1169 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 PARNO95453 639 aaKnown RBP15.51■□□□□ 0.07
SNRPA-208ENST00000600456 BMP15O95972 392 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 SELPP16109 830 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 CYP2C18P33260 490 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 RFC2P35250 354 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 FXR2P51116 673 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNRPA-208ENST00000600456 MDM2Q00987 491 aaPredicted RBP15.51■□□□□ 0.07
SNRPA-208ENST00000600456 RESTQ13127 1097 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 PPIGQ13427 754 aaKnown RBP eCLIP15.51■□□□□ 0.077e-9■□□□□ 9.6
SNRPA-208ENST00000600456 UGCGQ16739 394 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 TRIM71Q2Q1W2 868 aaKnown RBP15.51■□□□□ 0.07
SNRPA-208ENST00000600456 MARCH8Q5T0T0 291 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 RPAINQ86UA6 219 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 FERMT3Q86UX7 667 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 RAB34Q9BZG1 259 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 WNT8AQ9H1J5 351 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 PRO3102Q9H379 93 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 PCDHA2Q9Y5H9 948 aa15.51■□□□□ 0.07
SNRPA-208ENST00000600456 UMODL1Q5DID0 1318 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 A0A1W2PPC1 479 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 CKBP12277 381 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 IGBP1P78318 339 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 ATP2C1P98194 919 aaPredicted RBP15.5■□□□□ 0.07
SNRPA-208ENST00000600456 RSPH3Q86UC2 560 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 BANK1Q8NDB2 785 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 ERMNQ8TAM6 284 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 HSD17B14Q9BPX1 270 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 NIFKQ9BYG3 293 aaKnown RBP15.5■□□□□ 0.07
SNRPA-208ENST00000600456 UBE2OQ9C0C9 1292 aaKnown RBP15.5■□□□□ 0.07
SNRPA-208ENST00000600456 ZSWIM4Q9H7M6 989 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 STK24Q9Y6E0 443 aa15.5■□□□□ 0.07
SNRPA-208ENST00000600456 ZBTB42B2RXF5 422 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 MAGEB2O15479 319 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 LYPLA2O95372 231 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 PFKMP08237 780 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 IQCF3P0C7M6 154 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 CSF2RAP15509 400 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 THPOP40225 353 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 TECP42680 631 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 CCL23P55773 120 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 PDIA5Q14554 519 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 ARL6IP4Q66PJ3 421 aaKnown RBP15.49■□□□□ 0.07
SNRPA-208ENST00000600456 MTHFD1LQ6UB35 978 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 LRRC8DQ7L1W4 858 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 C4orf19Q8IY42 314 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 WNT8BQ93098 351 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 EIF2AK1Q9BQI3 630 aaKnown RBP15.49■□□□□ 0.07
SNRPA-208ENST00000600456 LXNQ9BS40 222 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 PPME1Q9Y570 386 aa15.49■□□□□ 0.07
SNRPA-208ENST00000600456 SMIM35A0A1B0GVV1 85 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 POTEMA6NI47 508 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 STBD1O95210 358 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 C22orf31O95567 290 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 KLRC1P26715 233 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 TARBP2Q15633 366 aaKnown RBP15.48■□□□□ 0.07
SNRPA-208ENST00000600456 HAUS3Q68CZ6 603 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 DTHD1Q6ZMT9 781 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 RUFY4Q6ZNE9 571 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 RPUSD2Q8IZ73 545 aaKnown RBP15.48■□□□□ 0.07
SNRPA-208ENST00000600456 TRAPPC12Q8WVT3 735 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 DYDC2Q96IM9 177 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 TUFT1Q9NNX1 390 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 IL23AQ9NPF7 189 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 RGL1Q9NZL6 768 aa15.48■□□□□ 0.07
SNRPA-208ENST00000600456 SEPT9Q9UHD8 586 aaPredicted RBP15.48■□□□□ 0.07
SNRPA-208ENST00000600456 COLQQ9Y215 455 aaPredicted RBP15.48■□□□□ 0.07
SNRPA-208ENST00000600456 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 SLITRK3O94933 977 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
SNRPA-208ENST00000600456 MUTP22033 750 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 CYP4A11Q02928 519 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 FAM26DQ5JW98 314 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 ZNF618Q5T7W0 954 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 PSRC1Q6PGN9 363 aaPredicted RBP15.47■□□□□ 0.07
SNRPA-208ENST00000600456 TRAF7Q6Q0C0 670 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 ANO5Q75V66 913 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 OTUD6AQ7L8S5 288 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 EXOC8Q8IYI6 725 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 NME8Q8N427 588 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 IGSF22Q8N9C0 903 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 SCLYQ96I15 445 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 POLR3CQ9BUI4 534 aaPredicted RBP15.47■□□□□ 0.07
SNRPA-208ENST00000600456 LRWD1Q9UFC0 647 aa15.47■□□□□ 0.07
SNRPA-208ENST00000600456 XRCC6P12956 609 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNRPA-208ENST00000600456 RPA1P27694 616 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms