RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 MEIS2O14770 477 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 TLL1O43897 1013 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 SORBS3O60504 671 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 KINO60870 393 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 CA3P07451 260 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 WDR5P61964 334 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 MRPS9P82933 396 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 SP2Q02086 613 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 IKBKEQ14164 716 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 ZRSR1Q15695 479 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 USP17L6PQ6QN14 398 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 CYFIP1Q7L576 1253 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 ATXN2LQ8WWM7 1075 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 PPM1EQ8WY54 764 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 VWCEQ96DN2 955 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 CTAGE1Q96RT6 745 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 PYM1Q9BRP8 204 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 RIC8AQ9NPQ8 531 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 HOOK1Q9UJC3 728 aaKnown RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 CLIC4Q9Y696 253 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 MORC2Q9Y6X9 1032 aaPredicted RBP10.55□□□□□ -0.72
FARP1-226ENST00000599040 KAT6AQ92794 2004 aa10.55□□□□□ -0.72
FARP1-226ENST00000599040 MAFGO15525 162 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 GADD45BO75293 160 aaPredicted RBP10.54□□□□□ -0.72
FARP1-226ENST00000599040 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 MYOGP15173 224 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 TXLNAP40222 546 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 THPOP40225 353 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 AP3B2Q13367 1082 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 GSE1Q14687 1217 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 GPT2Q8TD30 523 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 GPR20Q99678 358 aa10.54□□□□□ -0.72
FARP1-226ENST00000599040 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.54□□□□□ -0.72
FARP1-226ENST00000599040 RSPH10B2B2RC85 870 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 MARCH6O60337 910 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 NBNO60934 754 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 LGR5O75473 907 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
FARP1-226ENST00000599040 RSPH10BP0C881 870 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 GCFC2P16383 781 aaKnown RBP10.53□□□□□ -0.72
FARP1-226ENST00000599040 FAM160A1Q05DH4 1040 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 MTMR1Q13613 665 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 AAK1Q2M2I8 961 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 TRIM71Q2Q1W2 868 aaKnown RBP10.53□□□□□ -0.72
FARP1-226ENST00000599040 ZNF618Q5T7W0 954 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 NEK8Q86SG6 692 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 FSIP1Q8NA03 581 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 USP38Q8NB14 1042 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 CHAMP1Q96JM3 812 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
FARP1-226ENST00000599040 RAD9AQ99638 391 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 RAB34Q9BZG1 259 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 PCDHA7Q9UN72 937 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 PCDHA6Q9UN73 950 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 PCDHA8Q9Y5H6 950 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 NRCAMQ92823 1304 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 NCOR1O75376 2440 aa10.53□□□□□ -0.72
FARP1-226ENST00000599040 GJB5O95377 273 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 AMHP03971 560 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 POU3F3P20264 500 aaPredicted RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 CMA1P23946 247 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 HOXC8P31273 242 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 MRPS5P82675 430 aaKnown RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 SP4Q02446 784 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 TAP1Q03518 808 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 SEMA3FQ13275 785 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 SKIV2LQ15477 1246 aaKnown RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 CCDC85BQ15834 202 aaPredicted RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 L1TD1Q5T7N2 865 aaKnown RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 UTP14CQ5TAP6 766 aaKnown RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 JAKMIP3Q5VZ66 844 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 ARL6IP4Q66PJ3 421 aaKnown RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 TAF2Q6P1X5 1199 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 RSPH3Q86UC2 560 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.73
FARP1-226ENST00000599040 ARNTL2Q8WYA1 636 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 SEPT1Q8WYJ6 367 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 SEPT8Q92599 483 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 APBB2Q92870 758 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 TNMDQ9H2S6 317 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 RNPEPQ9H4A4 650 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 ERAP1Q9NZ08 941 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 DOCK5Q9H7D0 1870 aa10.52□□□□□ -0.73
FARP1-226ENST00000599040 MUC3AQ02505 3323 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms